Ralstonia pseudosolanacearum FQY_4: F504_2948
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Entry
F504_2948 CDS
T02751
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rse
Ralstonia pseudosolanacearum FQY_4
Pathway
rse00300
Lysine biosynthesis
rse00470
D-Amino acid metabolism
rse01100
Metabolic pathways
rse01110
Biosynthesis of secondary metabolites
rse01120
Microbial metabolism in diverse environments
rse01230
Biosynthesis of amino acids
Module
rse_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rse00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
F504_2948
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
F504_2948
Enzymes [BR:
rse01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
F504_2948
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AGH85459
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All DBs
Position
3157388..3158674
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AA seq
428 aa
AA seq
DB search
MRRPDGFPFMSESLIRQDGALMIEGVALEAIAARFGTPTYVYSRAALTANYRAYAAACEG
RNARVQYAMKANSNLAVLQIFAQLGAGFDIVSGGELRRVLAAGGKAADVVFSGVGKTADE
MRLALEAGVACFNVESIPELHRLNEVAGSLGKTAPVSLRVNPDVDAKTHPYISTGLKGNK
FGVAFDEVLPTYRAAAAMPNLRVVGIDCHIGSQITEVSPYLDAIDKVLDVVARLDAEGIR
LSHIDVGGGLGITYTDETPPDITAFARTLLDRIEQRGFGDRTVLFEPGRSLVGNAGLLLT
RVEFLKPGAAKNFCIVDAAMNDLARPAMYEAYHHIVPVRERGGAPTVYDIVGPVCESGDW
LGRDRALDAQPGDLLAILSAGAYGFTMSSNYNTRGRAAEVIVDGDRVHVARERERFEDLI
RGEQLLSA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
gtgcggcgccctgatggtttcccgttcatgtccgagtccctgatccgccaggacggcgcc
ctgatgatcgaaggcgtcgcgctcgaggcgattgccgcccggttcggcacgcccacctac
gtctattcgcgcgccgccctgaccgccaactaccgcgcctacgcggccgcctgcgagggc
cgcaacgcgcgcgtgcagtacgccatgaaggccaactccaacctggcggtgctgcagatc
ttcgcgcaactgggcgccggcttcgacatcgtctcgggcggggaactgcggcgcgtgctg
gccgccggaggcaaggccgccgacgtggtgttctcgggggtgggcaagaccgccgacgag
atgcgcctggcgctcgaagccggtgtcgcctgcttcaacgtcgaatcgatccccgagctg
caccggctcaacgaggtggccggctcgctgggcaagaccgcgccggtgtcgctgcgcgtc
aacccggacgtggatgccaagacccacccgtacatctccaccggcctgaagggcaacaag
ttcggcgtcgcgttcgatgaagtcctgccgacctaccgcgcggccgcggccatgccgaac
ctgcgcgtggtcggcatcgactgccatatcggttcgcagatcaccgaggtctcgccgtac
ctggacgcgatcgacaaagtgctcgacgtggtggcccggctcgacgccgaaggcatccgc
ctgtcgcacatcgatgtgggcggcggcctgggcatcacctataccgacgagacgccgccg
gacatcaccgccttcgcccgcacgctgctggaccgcatcgagcagcgcggcttcggtgac
cgcaccgtgctgttcgagcccggccgctcgctggtcggcaatgccggcctgctgctgacg
cgggtcgaattcctcaagcccggcgcggccaagaacttctgcatcgtcgatgcggccatg
aacgacctggcccgcccggcgatgtacgaggcgtaccaccacatcgtgccggtgcgcgag
cgcggcggcgcgccgaccgtctacgacatcgtcggcccggtctgcgaatcgggcgactgg
ctcggccgcgaccgcgcgctcgacgcgcagccgggcgatctgctggcgatcctgtctgcg
ggcgcctacggcttcaccatgagctcgaactacaacacccgcggccgcgcggccgaagtc
atcgtcgacggcgaccgggtacacgtggcacgcgagcgcgagcgcttcgaagacctgatc
cgcggcgagcagctgctgtcggcctga
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