Ralstonia pseudosolanacearum FQY_4: F504_420
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Entry
F504_420 CDS
T02751
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rse
Ralstonia pseudosolanacearum FQY_4
Pathway
rse03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F504_420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rse03400
]
F504_420
Enzymes [BR:
rse01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
F504_420
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
F504_420
DNA repair and recombination proteins [BR:
rse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
F504_420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
Motif
Other DBs
NCBI-ProteinID:
AGH82942
LinkDB
All DBs
Position
433337..434203
Genome browser
AA seq
288 aa
AA seq
DB search
MPELPEVEVTRLGLVPHLTGRRIVRAVVRHHGLRWPVDPALPELLGGRTVARVLRRGKYL
LIECVPDIAHGPQAGAGWLLVHLGMTGTLRVLETPAAPGTHDHLDIELADAAGRPITLRY
RDPRRFGAVLWHDGDEAALSAHPLLRNLGIEPFDTRFDGDWMHARTRGRSAAIKTVLLAG
DIVVGVGNIYCSESLFRAGIRPTTAAGRISRPRYAALAEAIRATLADAIARGGSTLRDFV
GSDGQSGYFQLDALVYDRAGLPCRVCGTPIRQIVQGQRSTFYCPACQR
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgcccgaggtcgaggtcacccggctgggactcgtcccgcacctgacaggt
cggcggatcgtccgcgccgtggtgcggcatcacggcctgcgctggccggtcgatccggcg
ctgcccgagctgctgggcgggcgcacggtcgcgcgcgtgctgcgccggggcaagtatctg
ctgatcgagtgcgtgcccgacattgcccacgggccgcaggcgggggccggctggctgctg
gtccacctgggcatgacgggcaccctgcgcgtgctggagacgcctgccgcacccggcacc
cacgaccatctcgacatcgagctcgcggacgcggccggccggcccatcacattgcgctac
cgcgatccgcgccgttttggtgccgtgctatggcacgatggggacgaggccgcgctgtcg
gcgcatccgctgctgcgcaacctcggcatcgagcccttcgacacgcgcttcgacggcgac
tggatgcacgcccgcacccgcggccgcagcgctgccatcaagaccgtgctgctggccggc
gacatcgtcgtcggcgtcggcaatatctattgctcggaaagcctgttccgagccggtatc
cggcccaccacggcggccgggcgcatcagccggccgcgctatgcggcgctggcggaggcc
atccgtgccacgctggcggacgccattgcccgcggcggcagcacgctgcgcgacttcgtc
ggctcggacgggcagagcggctatttccagctggatgcgctcgtctacgaccgagcaggc
ttgccgtgccgcgtgtgcggcacgccgatccgccagatcgtgcagggccagcgctcgacc
ttctattgcccggcctgtcagcgctga
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