Ralstonia pseudosolanacearum FQY_4: F504_4772
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Entry
F504_4772 CDS
T02751
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA-like protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rse
Ralstonia pseudosolanacearum FQY_4
Pathway
rse03420
Nucleotide excision repair
rse03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F504_4772
03430 Mismatch repair
F504_4772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rse03400
]
F504_4772
Enzymes [BR:
rse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F504_4772
DNA repair and recombination proteins [BR:
rse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F504_4772
MMR (mismatch excision repair)
Other MMR factors
F504_4772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AGH87279
LinkDB
All DBs
Position
megaplasmid:1633017..1635149
Genome browser
AA seq
710 aa
AA seq
DB search
MPAAIPTPETAPAPDYLAQLNDQQRLAVEFGISGADAAQTGPLLVLAGAGSGKTHTLGWR
VAHLVANGADPQRILLLTFSRRAASELSTRAGHLLARALQGSAGARSAAGTAYRTALPWA
GTFHGIGARLLREYAERIGLAPDFTIHDRSDAADLLNVVRHELNLSTKERRFPLKQTCLA
IYSRAINAESPLDAVLKQHFPWCAMWQAQLRTLFDAYVEAKQAQHILDYDDLLLYWHAMV
ADAGLAAEIGARFDHILVDEYQDTNRLQSSILRALRPDGRGLTVVGDDAQSIYAFRAATV
RNILDFPRHFTRPAHTVLLERNYRSTQPILEASNGVMRFATERFAKTLWTDRASTHRPRL
ISVRDEAEQARCVAEQVLRHREGGLALKSQAVLFRTASHSAPLEIELARRNIPFVKYGGL
KFLEAAHVKDVLSVLRWAENPRNRIAGFRVIQLLPGAGPATAARVLDAMAEAADPVAALL
AHAPPARLAGDWAALMTLMATLRAPKDNATWAGELEAVGAWYAPHMERLHDDAAVRQGDL
DQLARMAATYASRERFLTEMTLDPPELTSDESGEPYRDEDYLILSTIHSSKGQEWKAVYL
LNAVDGCMPADLGAGSHDELEEERRLLYVAMTRARDHLDILVPQRFYMTQQTPNGDRHLY
ASRTRFIPPALLPLFEACAWPPPEPGADPAAEARAAAKVDLAKKMRGYWR
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgccgccatccccaccccggaaaccgcccccgcgcccgactacctggcgcaactg
aacgaccagcagcgcctggccgtcgagttcggcatttcgggggcggatgcggcgcagacc
ggcccgctgctggtgctggcgggcgcgggctccggcaagacgcatacgctgggctggcga
gtggcgcacctggtggccaatggcgccgatccgcagcgcatcctgctgctgacgttctcg
cgccgggcggcgagcgagctgtccacccgcgccggccacctgctggcgcgcgccctgcag
ggcagcgccggcgcgcggtcggccgccggcaccgcataccggaccgcgctgccctgggcc
ggcaccttccacggcatcggcgcgcgcctgctgcgcgaatacgccgagcgcatcggcctc
gcgcccgatttcaccatccacgaccgcagcgacgcggccgacctgctcaatgtcgtgcgg
catgagttgaacctgtcgaccaaggaacgccgcttcccgctcaagcagacctgcctggcc
atctactcgcgcgccatcaatgccgagagcccgctggatgccgtgctcaagcagcacttc
ccgtggtgcgcgatgtggcaggcgcagctgcgcacgctgttcgacgcctacgtggaggcc
aagcaggcccagcacatcctcgactacgacgacctgctgctgtactggcacgcgatggtg
gccgacgccggcctggccgccgagatcggcgcgcgcttcgaccacatcctcgtcgacgaa
taccaggacacgaaccggctgcagtcgtcgatcctgcgcgcgctgcggcccgacgggcgc
ggcctgacggtggtcggcgacgatgcgcaatccatctacgccttccgcgcggcgacggtg
cgcaacatcctcgacttcccgcgccacttcacgcggccggcgcacacggtgctgctggag
cgcaattaccgctccacgcagccgatcctggaggcgtccaacggcgtgatgcgctttgcc
accgagcgcttcgccaagacgctgtggaccgaccgcgcatcgacccaccgcccgcgcctg
atctcggtgcgcgacgaggccgagcaagcgcgctgcgtggccgagcaggtgctgcggcat
cgcgagggcgggctggcgctgaagtcgcaggccgtgctgttccgcaccgccagccacagc
gcgccgctggagatcgaactcgcccgccgcaacatccccttcgtcaaatacggcggactc
aaattcctggaggccgcgcacgtcaaggacgtgctgtcggtgctgcgctgggccgagaat
ccgcgcaaccgcatcgccggcttccgcgtcatccagctgctgccgggcgccggccccgcc
accgccgcgcgcgtgctcgatgccatggccgaggcggccgacccggtcgccgcgctgctg
gcccatgcgccgccggcccgcctggccggcgactgggcggcgctgatgacgctgatggcc
acgctgcgcgcaccgaaggacaacgcaacctgggccggtgaactggaggccgtcggcgcc
tggtacgccccccacatggagcgcctgcacgacgatgcggccgtccgccagggcgatctc
gaccagctcgcccgcatggccgcgacctacgcctcgcgcgagcgcttcctgaccgagatg
acgctcgacccgcccgagctgaccagcgatgaatccggcgagccgtaccgcgacgaggac
tacctgatcctgtcgaccatccactcctccaaggggcaggagtggaaggccgtctacctg
ctcaacgccgtggacggctgcatgcccgccgacctgggcgccggctcgcacgacgagctg
gaggaagagcgccggctgctctacgtggccatgacgcgcgcccgcgaccacctcgacatc
ctggtgccgcagcgcttctacatgacccagcagacgcccaacggcgaccgccacctctac
gcatcgcgcacgcgcttcattccgccggcgctgctgccgctgttcgaggcctgcgcctgg
ccgccgcccgagcccggcgccgacccggcggccgaggcacgcgcggcggccaaggtcgac
ctggccaagaagatgcgcggctattggcggtag
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