Ralstonia pseudosolanacearum FQY_4: F504_5147
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Entry
F504_5147 CDS
T02751
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
rse
Ralstonia pseudosolanacearum FQY_4
Pathway
rse02020
Two-component system
rse02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F504_5147 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
F504_5147 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rse03021
]
F504_5147 (rpoN)
Transcription machinery [BR:
rse03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F504_5147 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF3435
HTH_IclR
DUF7344
Motif
Other DBs
NCBI-ProteinID:
AGH87652
LinkDB
All DBs
Position
megaplasmid:2079363..2080865
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AA seq
500 aa
AA seq
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MVKAALEMRAKQHLALTPRLQQSVKLLQLSATEFAQEMQEALASNPFLEEVDDNTGAPPE
AARPGEAMPGTEADGATADHSPPDEAPLETTTSAIETDPAIAASDEFPADFGSYTSYGPA
HHGDGEDSDIGEWVHATPTLREHLRQELLSYRLSERDSLLALTVIEALDDDGYLRQTLFE
LMPLAPVEPAPTEKEMQIALALVQSLDPPGVAARDLSECLRLQIEARPADTEAEERVQEI
AQDIVRSHLPRLAKRDLTHIRRAVGCDEDELREACALIRTLDPRPGLRFSQAHAGYVVPD
VIVAKIKGKWVAVTNPAVAPCARINKVYAELFAQTRGHHRTPLAHQLQEARWLIRNAQQR
FATIQRVAVAIVAHQKHFLEYGEVAMRPLVLRDVAEELGLHESTISRATGNKFMATPRGI
FEFKYFFSRQLATDTGGACSAASVRALLKEMIEAEDAQAPLSDVSLAKMLAEQGVIVARR
TVAKYRGLMRIAPAELRRQV
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaagccgctctcgaaatgcgtgcgaagcagcatctcgcgctgacgccccggctg
cagcagtccgtgaaattgctgcagctgtcggcgaccgaatttgcacaggaaatgcaggaa
gcgcttgccagcaacccgttcctggaagaagtcgacgacaacacgggcgcaccgccggaa
gcggcccggcccggtgaagccatgcccggcaccgaagccgacggcgccaccgccgaccac
tcgccgccggacgaggcgcccctcgagaccaccaccagcgccatcgagaccgaccccgcc
atcgccgcctccgacgagtttcccgccgacttcggcagctacaccagctacggcccggcc
catcacggcgacggcgaagacagcgacatcggcgaatgggtgcacgccacgcccaccctg
cgcgagcacctgcgccaggagctgctcagctaccggctctccgagcgcgacagcctgctc
gccctgacggtgatcgaagcgctggacgacgacggctacctgcgccagacgctcttcgag
ctgatgccgctggcgccggtcgagcccgcgcccaccgagaaggaaatgcagatcgcgctg
gcgctggtgcagagcctggacccgccgggcgtggccgcgcgcgatctgtccgaatgcctg
cgcctgcagatcgaggcgcgtccggccgatacggaagccgaggagcgtgtgcaggagatc
gcgcaggacatcgtgcgcagccatctgccgcgcctggccaagcgcgacctgacccacatc
cgccgcgcggtcggctgcgacgaagacgagctgcgcgaagcctgcgcgctgatccgcacg
ctggacccgcgcccggggctgcgcttctcgcaggcgcacgcgggctatgtcgtgcccgac
gtgatcgtcgccaagatcaagggcaagtgggtggccgtgaccaacccggcggtggcgccg
tgcgcgcgcatcaacaaggtctacgccgaactcttcgcgcagacgcgcggccatcaccgc
acgccgctcgcgcaccagctacaggaagcgcgctggctgatccgcaacgcgcagcagcgc
ttcgccaccatccagcgcgtggccgtggccatcgtcgcgcaccagaagcacttcctcgaa
tacggcgaggtcgcgatgcggccgctggtgctgcgcgacgtggccgaagagctgggcctg
catgaatcgaccatctcgcgcgccaccggcaacaagttcatggcgacgccgcgcggcatc
ttcgagttcaagtacttcttctcgcgccagctcgccaccgacacgggcggcgcctgttcg
gcggcgtccgtgcgggccctgctcaaggagatgatcgaggccgaagacgcgcaggcaccg
ctgtccgatgtgtcgctggccaagatgctggccgagcagggcgtgatcgtcgcgcgccgc
acggtggccaagtatcgcggcctgatgcgcatcgcacccgccgaactccggcggcaggtc
tga
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