Ralstonia pseudosolanacearum FQY_4: F504_921
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Entry
F504_921 CDS
T02751
Name
(GenBank) 3'-to-5' oligoribonuclease (orn)
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rse
Ralstonia pseudosolanacearum FQY_4
Pathway
rse03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rse00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
F504_921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rse03019
]
F504_921
03009 Ribosome biogenesis [BR:
rse03009
]
F504_921
Messenger RNA biogenesis [BR:
rse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
F504_921
Ribosome biogenesis [BR:
rse03009
]
Eukaryotic type
Pre-60S particles
RNases
F504_921
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CTD1
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
AGH83440
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All DBs
Position
945906..946565
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AA seq
219 aa
AA seq
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MSTPLSQPAAASSSATHVTTKIAAKSDNNLVWLDMEMTGLSPENDRIIEVAMVVTDSELN
VLAEGPVLVIHQPDEILDGMDAWNKGTHGRSGLIDKVKASITTEAQAEADLLDFLKKWVP
KSKSPMCGNSICQDRRFMARYMPKLEAYFHYRNLDVSTLKELCKRWQPAIAKGFIKRQQH
TAYADIVESIEELRYYRQHFIRDVPQTPEAEALASSVAP
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacccctctttcccagccggctgcggcatcttcgagcgccacccacgtcaccacc
aaaatcgccgccaagagcgacaacaacctggtctggctcgacatggagatgaccggcctg
agccccgagaacgaccgcatcatcgaggtggccatggtcgtcacggactcggagctgaac
gtgctggccgaaggcccggtgctggtgatccaccagccggacgagatcctcgacggcatg
gatgcctggaacaagggcacgcacggccgctcgggcctgatcgacaaggtgaaggcctcg
atcaccaccgaagcgcaggccgaagccgatctgctggacttcctgaagaagtgggtgccc
aagagcaagtcgccgatgtgcggcaactccatctgccaggaccgtcgcttcatggcgcgc
tacatgcccaagctggaggcgtacttccactaccgcaacctggacgtctccacgctcaag
gaactttgcaaacgttggcagccggccatcgccaagggcttcatcaagcgccagcagcac
accgcgtacgccgatatcgtcgaatcgatcgaagagctgcgctactaccgccagcacttc
attcgcgacgtgccgcagacgccggaagccgaagcgctggcctcctcggtcgcgccgtaa
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