Rhodococcus sacchari: OED52_01750
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Entry
OED52_01750 CDS
T10960
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
rsf Rhodococcus sacchari
Pathway
rsf02020
Two-component system
rsf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rsf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OED52_01750
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OED52_01750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsf03000
]
OED52_01750
Transcription factors [BR:
rsf03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
OED52_01750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
GntR
Sigma70_r4
Sigma70_r4_2
MarR_2
HTH_23
HTH_24
HTH_29
HTH_3
HTH_31
HTH_Cmi2_C
wHTH-PRTase_assc
HTH_28
HTH_IclR
MarR
DUF977
DUF134
DUF6907
Motif
Other DBs
NCBI-ProteinID:
UYP19329
LinkDB
All DBs
Position
complement(381479..382153)
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AA seq
224 aa
AA seq
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MDEVLARAGIFQGVEPSAVAALIKELQPVDFPRGHVIFNEGEPGDRLYIIVSGKVKLGRR
SPDGRENLLTIMGPSDMFGELSIFDPGPRTSTATTVTEVRAVSMDRDALKAWIDQRPEIA
EQLLRVLARRLRRTNNSLADLIFTDVPGRVAKALLQLAQRFGTQEAGALRVTHDLTQEEI
AQLVGASRETVNKALADFAHRGWLRLEGKSVLISDSERLARRAR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
gtggacgaggtcctggccagagcaggcatcttccaaggagtcgagccctctgcggttgcg
gcgctgatcaaagagctgcaaccggtcgatttcccgcgcggccatgtcatcttcaacgag
ggtgagcccggcgatcggctgtacatcatcgtttcgggcaaggtgaagctcggacgtcgt
tcgcccgacggccgtgagaacctcctgacgatcatgggcccgtccgacatgttcggtgag
ctgtccatcttcgacccgggtccgcgtacctccaccgccaccaccgtcaccgaggtgcgg
gccgtgagcatggaccgcgacgccctcaaggcgtggatcgaccagcgccccgagatcgcc
gagcagctcctgcgcgtcctcgcacgtcgtctgcgccgcaccaacaacagcctcgccgac
ctgatcttcacggacgttcccggccgtgtcgccaaggcgctgctgcagctggcccagcgt
ttcggcacccaggaggccggcgccctgcgcgtcacccacgacctgacgcaggaagagatc
gcgcagctcgtcggcgcctcccgcgagaccgtgaacaaggccctggccgacttcgcgcac
cgcggctggctgcgcctcgagggcaagagcgttctgatctccgactcggagcgtctggcg
cgtcgcgctcgctga
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