Rhodococcus sacchari: OED52_02030
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Entry
OED52_02030 CDS
T10960
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
rsf Rhodococcus sacchari
Pathway
rsf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rsf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OED52_02030 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsf01007
]
OED52_02030 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsf03016
]
OED52_02030 (lysS)
Enzymes [BR:
rsf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
OED52_02030 (lysS)
Amino acid related enzymes [BR:
rsf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
OED52_02030 (lysS)
Transfer RNA biogenesis [BR:
rsf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
OED52_02030 (lysS)
Prokaryotic type
Other AARSs
OED52_02030 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
UYP19376
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All DBs
Position
441369..442880
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AA seq
503 aa
AA seq
DB search
MSDATVQQPDDTPEQMRVRRDKRERLLAQGSEPYPVIVPRTHTLAEIRAAYPDLEPDTAT
GTIVGIAGRVMFSRNTGKLCFATLQEGDGTQLQVMLSLAGVGEEALAQWKSEVDLGDIVY
VHGEVISSRRGELSVMADSWNMASKALRPLPVAHKEMNEETRVRQRYVDLIVRPEARRNA
RMRVAVVRELRNALERRGFLEVETPMLQTLHGGAAARPFVTHSNALDMDLYLRIAPELFL
KRCVVGGIEKVFEINRNFRNEGADSTHSPEFSMLETYEAYGTYDDSARMIREIIQEIAMA
VFGSHVVTLSDGTEYDLGGEWKTLEMYPSLSEAIGTEVTPDTTLEELTALADRVGLEIPE
GKGWGHGKLVEELWEHMCGDQLYEPTFVRDFPVETSPLTRDHRSVRGVTEKWDLYVRGFE
LATGYSELVDPVIQRERFVDQARLASAGDDEAMVLDEDFLAAMEQGMPPTTGTGMGIDRL
LMALTGLGIRETILFPIVRPNAR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgatgccaccgttcagcagcccgacgacacccccgaacagatgcgggtccgccgc
gacaagcgcgaacggctcctggcacagggctcggaaccctatcccgtcatcgttccgcgg
acgcacaccctcgcggagatccgcgccgcgtaccccgatctggaacccgacaccgccacc
ggcaccatcgtcggcatcgcgggccgggtcatgttctcccggaacaccggcaaactgtgc
ttcgcgacgctgcaggagggtgacggcacccagctgcaggtcatgctgagcctcgccggt
gtcggcgaggaggcactcgcgcagtggaagtccgaggtcgacctcggcgacatcgtgtac
gtgcacggcgaggtcatcagctcccgccgcggtgagctcagcgtcatggccgactcgtgg
aacatggcgtcgaaggccctgcggccgctgcccgtcgctcacaaggagatgaacgaggag
acgcgcgtccggcagcgctacgtcgacctcatcgtgcgtcccgaggcgcgccgcaacgcc
cgtatgcgtgtcgcggtggtgcgggagctgcgcaacgccctcgagcggcgcggtttcctc
gaggtcgagacgccgatgctgcagaccctgcatggtggcgcggccgcccgcccgttcgtc
acgcactcgaacgcgctcgacatggatctgtacctgcgtatcgcgccggagctcttcctc
aagcgctgcgtggtgggcggtatcgagaaggtcttcgagatcaaccgcaatttccgcaac
gagggcgccgactccacccactcgccggaattctcgatgctcgagacctacgaggcgtac
ggcacctacgacgattcggcgcggatgatccgcgagatcatccaggagatcgcgatggcg
gtcttcggcagccacgtggtgacgctgtccgacggcaccgaatacgacctcggtggcgaa
tggaagaccctggagatgtatccctccctgtcggaggcgatcggcaccgaggtgaccccc
gacaccaccctggaggagctcaccgcgctcgccgaccgggtgggtctggaaatccccgag
ggcaagggctggggccacggcaaactcgtcgaggaactgtgggagcacatgtgtggcgac
cagctgtacgagcccaccttcgtgcgtgacttcccggtcgagacctccccgctgacccgc
gaccaccgttccgtgcgcggcgtcaccgagaagtgggatctctacgtccgcggtttcgag
ctcgccaccggctactcggaactcgtcgatccggtgatccagcgcgagcggttcgtcgac
caggcgcgcctggcgtcggccggtgacgacgaagcgatggtcctcgacgaggatttcctc
gccgccatggaacagggaatgccgcccaccacgggtaccggaatgggaatcgatcgcctt
ctcatggcgctcaccggtctgggtatccgggaaacaatcctgttcccgattgtccggccg
aacgcccgttaa
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