Rhodococcus sacchari: OED52_02115
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Entry
OED52_02115 CDS
T10960
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
rsf Rhodococcus sacchari
Brite
KEGG Orthology (KO) [BR:
rsf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsf03400
]
OED52_02115 (radA)
DNA repair and recombination proteins [BR:
rsf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OED52_02115 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DUF7125
DnaB_C
ChlI
Lon_C
AAA_22
AAA_16
NACHT
AAA
nSTAND_NTPase5
Rad51
AAA_19
DUF7129
nSTAND3
AAA_30
NB-ARC
ABC_tran
AAA_29
RsgA_GTPase
Zn_ribbon_8
AAA_24
PAXNEB
MMR_HSR1
NTPase_1
TniB
AAA_14
Hpr_kinase_C
AAA_5
AAA_18
MCM
DAP3
SLFN-g3_helicase
Zn_ribbon_15
Motif
Other DBs
NCBI-ProteinID:
UYP19393
LinkDB
All DBs
Position
complement(457738..459126)
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AA seq
462 aa
AA seq
DB search
MAKTKTLYRCSDCSHTVAKWVGRCPECGTWGSMDEAPVQPVAVASRAGTSLARAGAAAVL
PSTPATPLSQIDGKATHAKPTGISELDRVLGGGVVPGSVVLLAGEPGVGKSTLLLEVVHR
WALRGEADRALYVTGEESAGQVRLRADRTGAVHDRVYLAAENDLATIFGHVEQVKPTLLV
VDSVQTMLAADVEGVTGGVTQVRAVTSALTSLAKSSGIPVLLVGHVTKDGAVAGPRSLEH
LVDVVLHFEGDKHSTLRMIRGVKNRFGAADEVGCFELVEDGIVGVSDPSGLFLQHRDEAV
PGTAVTVTMDGKRPLLGELQALVVPTHNPSPRRAVSGLDSARVAMVLAVLERRCGLGRLG
NCDVYASTVGGMRITDPSADLALALAVASAVRDRPVPAGTVLLGEVGLAGEVRRVTGAGR
RLAEAHRLGFDRGVVPRDVDGAPKGMKTFEVSNLAQALSTLS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtggccaagaccaagaccctctaccgctgttccgactgctcgcacaccgtcgccaagtgg
gtggggcggtgccccgagtgcgggacctgggggtccatggacgaggcccccgtccagccg
gtggccgtcgcctctcgcgccggcacgtcgctggcgcgggccggggccgccgccgtgctg
ccgagcaccccggccactcccctgtcgcagatcgacggcaaggccacccacgccaagccg
acgggcatctcggaactcgaccgggtgctcggcggcggtgtggtccccggctccgtggtc
ctgctggccggtgaacccggcgtcggcaagtcgacgctgctgctcgaggtcgtccaccgg
tgggcgctgcgcggcgaggccgatcgcgccctctacgtcacgggtgaggagtcggccggg
caggtgcgtctgcgcgccgaccgcaccggcgccgtgcacgaccgggtctatctcgccgcc
gagaacgacctcgcgacgatcttcgggcacgtcgagcaggtgaagccgacgctgctcgtc
gtcgactcggtacagaccatgctcgccgccgacgtcgagggcgtcaccggcggtgtcacc
caggtgcgggcggtgaccagcgccctgacctccctcgccaagtcgagcggaatcccggtg
ctgctcgtcggccacgtcaccaaggacggcgcggtcgccggtccgcgttcgctcgagcat
ctcgtcgacgtggtgctgcacttcgagggcgacaagcactccacgctgcgcatgatccgc
ggcgtgaagaaccgtttcggggcggccgacgaggtgggctgtttcgagctggtggaggac
ggcatcgtcggcgtcagcgacccgtcggggctgttcctgcagcaccgcgacgaggccgtc
cccggcaccgcggtcaccgtcacgatggacggcaagcggcccctgctcggcgaactgcag
gcgctggtcgtgcccacccacaatccgtcaccgcgacgcgcggtgagcggcctcgactcg
gcgcgggtcgcgatggtcctcgcggtgctcgagcggcgctgtggcctcggccgcctcggc
aactgcgacgtctacgcctccaccgtggggggcatgcggatcaccgacccgtccgccgac
ctcgcgctggcgctggccgtcgcgtcggcggtccgcgaccggcccgttccggcgggcacg
gtgctgctcggtgaggtcggtctcgccggggaggtccggcgcgtcacgggtgcgggccgg
cggctggcggaggcgcaccgcctcggcttcgaccggggtgtggtgccgcgcgacgtcgac
ggcgcccccaagggcatgaagaccttcgaggtgtcgaacctcgcccaggccctgtcgacg
ctgagctga
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