Rhodococcus sacchari: OED52_07315
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Entry
OED52_07315 CDS
T10960
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rsf Rhodococcus sacchari
Pathway
rsf00300
Lysine biosynthesis
rsf00470
D-Amino acid metabolism
rsf01100
Metabolic pathways
rsf01110
Biosynthesis of secondary metabolites
rsf01120
Microbial metabolism in diverse environments
rsf01230
Biosynthesis of amino acids
Module
rsf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rsf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OED52_07315 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OED52_07315 (lysA)
Enzymes [BR:
rsf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
OED52_07315 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UYP20335
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All DBs
Position
1601244..1602665
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AA seq
473 aa
AA seq
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MSAHPAGPRHAEIPHAPNLPVRPADAAALNELVPHVWPRNAARGEDGVLRIAGVAVTDLA
EKYGTPLFVVDEDDFRSRCREIAEAFGPSAKVHYASKAFLCTEVARWVHQEGLSLDVASG
GELAVALHAGFPAEKIAMHGNNKSVRELKTAVEAGVGHIVIDSLSEIDRLDEVAREAGVV
QDVLIRVTVGVEAHTHEFISTAHEDQKFGLSLAGGKAMEAVRRVFAADHLRLVGLHSHIG
SQIFDVDGFELAAHRVIGLLRDIVAEFGVEKTSQMHIVDLGGGLGISYVPSDDPPPVADL
AAKLGDIVRNESALAGLPEPTLAVEPGRAIAGPGTITLYEVGTIKDVEVGSGNTRRYISV
DGGMSDNIRTSLYQAEYESRLVSRVSDAEPVVSRVVGKHCESGDIVIRDAWMPADLAPGD
LLAVAATGAYCYSMSSRYNLLPRPAVVAVKDGVPRVLLRRETVEDLLSLEVSE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgcatccggcgggcccgcgtcacgcggagatcccgcacgccccgaacctgccc
gtgcgtcccgccgacgccgcggccctcaacgaactcgtcccgcacgtgtggccgcgcaac
gccgcccgcggtgaggacggggtgctgcggatcgcgggtgtcgcggtcaccgacctcgcc
gagaagtacggcacgccgctgttcgtcgtggacgaggacgacttccggtcccgctgccgg
gagatcgccgaggcgttcggtccgtccgcgaaggtgcactacgcctccaaggcgttcctg
tgcacggaggtcgcccgctgggtgcaccaggaggggctgtccctcgacgtcgcctccggc
ggcgaactcgccgtggccctgcacgccggtttcccggccgagaagatcgccatgcacggc
aacaacaagtccgtgcgggagctgaagacggcggtcgaggccggtgtcgggcacatcgtc
atcgactcgctgtccgagatcgaccgcctcgacgaggtcgcccgcgaggccggtgtcgtg
caggacgtgctcatccgcgtcaccgtcggtgtcgaggcgcacacgcacgagttcatctcc
accgcgcacgaggaccagaagttcggcctgtcgctggccggcggcaaggcgatggaggcc
gtgcgccgggtgttcgccgccgaccacctccggctcgtcggtctgcacagccacatcggc
tcgcagatcttcgacgtcgacggcttcgagctggccgcccaccgcgtgatcgggctgctg
cgcgacatcgtcgccgagttcggggtggagaagacctcgcagatgcacatcgtcgacctc
ggcggtggcctcggcatctcctacgtgccgagcgacgacccgccgccggtcgcggatctc
gccgcgaagctgggcgacatcgtccgcaacgagtcggccctcgccgggctgcccgagccg
accctggcggtcgagccgggccgcgccatcgccggaccgggaacgatcaccctctacgag
gtcggcaccatcaaggacgtcgaggtcggctccggcaacacgcgccgctacatcagcgtc
gacggcggcatgagcgacaacatccgcacctccctgtaccaggccgagtacgaatcgcgc
ctcgtctcccgcgtgagcgacgccgagccggtggtctcccgcgtggtgggcaagcactgc
gagagcggtgacatcgtcatccgcgacgcctggatgcccgccgacctggcacccggtgat
ttactggcggtcgcggccacgggtgcatactgctattcgatgtccagcaggtacaacctg
ctgcctcgccctgccgtcgtggcggtcaaggacggcgtcccgcgcgtcctgctgcgccgc
gagaccgtcgaagatctgctcagcttggaggtttcggagtga
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