Rhodococcus sacchari: OED52_08355
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Entry
OED52_08355 CDS
T10960
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rsf Rhodococcus sacchari
Pathway
rsf02024
Quorum sensing
rsf03060
Protein export
rsf03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rsf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
OED52_08355 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OED52_08355 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OED52_08355 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rsf02044
]
OED52_08355 (ffh)
Enzymes [BR:
rsf01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
OED52_08355 (ffh)
Secretion system [BR:
rsf02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
OED52_08355 (ffh)
Eukaryotic Sec-SRP protein
OED52_08355 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
cobW
ArsA_ATPase
Zeta_toxin
nSTAND3
AAA_22
AAA_31
APS_kinase
TctA
AAA_24
AAA_18
AAA_16
NPHP3_N
Thymidylate_kin
AAA_33
TsaE
6PF2K
NTPase_1
MobB
NACHT
AAA_25
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UYP20519
LinkDB
All DBs
Position
1834539..1836107
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AA seq
522 aa
AA seq
DB search
MFESLSDRLTGVLKDLRGKGRLSDADIDATCREIRLALLEADVALPVVREFIKKIKERAK
GAEVHGALNPAQQVVKIVNEELVGILGGETRRLKFAKNPPTVIMLAGLQGAGKTTLAGKL
AKWLKGQGHTPLLVACDLQRPGAVTQLQVVGERAGVAVFAPHPGTSIGGGDNELGVTAAD
PIAVAEQGVAEARNKQYDVVIVDTAGRLGIDQELMAQAAGIRDAVNPDEVLFVLDAMIGQ
DAVSTAEAFREGVGFTGVVLTKLDGDARGGAALSVRELTGQPIMFASTGEKLEDFDVFHP
ERMASRILGMGDVLTLIEQAEQVFDAKQAEATASKIGSGELTLEDFLEQMMAVRKMGPIA
NLLGMLPGAGQMKEALAAVDEKQLDRIQAIIRGMTPEERANPKIINGSRRLRIANGSGVK
VSDVNQLVDRFFEARKMMAAMAGQMGMPGARKNQRKKGKKGKKGGRGPTPPKVRGGLPGG
FPGLPGGMPAGMPDLSNMPKGLDELPPGLEGFDLSKLKFPKN
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgaatccctttccgacaggttgacaggggtcctgaaggacctgcgcggcaaggga
cggctgtccgacgcggacatcgacgcgacctgccgcgagatccgcctcgcgctgctcgag
gccgacgtcgcgctgccggtggtgcgcgagttcatcaagaagatcaaggaacgcgcgaag
ggcgccgaggtccacggtgcgctcaacccggcgcagcaggtcgtcaagatcgtcaacgag
gagctcgtcggcatcctcggtggtgagacccgccgtctgaagttcgccaagaacccgccg
accgtcatcatgctcgccggtctgcagggtgccggtaagaccacgctcgccggcaaactg
gcgaagtggctcaagggccagggtcacaccccgctgctcgtcgcctgcgacctgcagcgc
cccggtgccgtcacccagctgcaggtcgtcggcgaacgcgccggtgtcgcggtgttcgcc
ccgcatccgggcacgtccatcggtggcggcgacaacgaactcggtgtcacggccgccgac
ccgatcgcggtcgccgagcagggtgtcgccgaggcccgcaacaagcagtacgacgtggtc
atcgtcgacaccgccggacgcctcggcatcgaccaggagctgatggcgcaggccgccggc
atccgcgacgccgtgaatcccgacgaggtgctgttcgtcctcgacgccatgatcggccag
gacgccgtgagcaccgccgaggcgttccgcgagggcgtcggcttcaccggcgtggtgctc
accaagctcgacggcgacgctcgcggtggtgccgcgctcagcgtccgcgagctgaccggt
cagccgatcatgttcgcgtcgaccggtgagaagctcgaggacttcgacgtcttccacccc
gagcgcatggccagccgcatcctcggcatgggcgacgtgctcaccctcatcgagcaggcc
gagcaggtcttcgacgccaagcaggccgaggccaccgccagcaagatcggctccggtgag
ctcaccctcgaggacttcctcgagcagatgatggccgtccgcaagatgggtcccatcgcg
aacctgctgggcatgctgcccggtgcggggcagatgaaggaggccctggccgccgtcgac
gagaagcagctcgaccgcatccaggcgatcatccgcggtatgaccccggaggagcgtgcc
aacccgaagatcatcaacggttcgcggcgcctgcgcatcgccaacggttccggtgtgaag
gtctccgacgtcaaccagctcgtcgaccgcttcttcgaggcccgcaagatgatggccgcg
atggccgggcagatgggcatgccgggcgcccggaagaaccagcgcaagaagggcaagaag
ggcaagaagggcggacgtggcccgaccccgccgaaggtgcggggcggtctgcccggtggc
ttcccgggtctgcccggtggcatgccggccgggatgcccgacctgtcgaacatgcccaag
ggcctcgacgagctgcccccgggcctcgagggcttcgacctgtcgaagctgaagttcccg
aagaactga
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