KEGG   Rhodococcus sacchari: OED52_08900
Entry
OED52_08900       CDS       T10960                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
rsf  Rhodococcus sacchari
Pathway
rsf00300  Lysine biosynthesis
rsf00470  D-Amino acid metabolism
rsf01100  Metabolic pathways
rsf01110  Biosynthesis of secondary metabolites
rsf01120  Microbial metabolism in diverse environments
rsf01230  Biosynthesis of amino acids
Module
rsf_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rsf00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    OED52_08900 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    OED52_08900 (dapF)
Enzymes [BR:rsf01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     OED52_08900 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: UYP20614
LinkDB
Position
1940244..1941110
AA seq 288 aa
MEFSKGHGTENDFVILPDPDARLDLDAPRIAALCDRRRGLGADGLLRVARAGALVAAGVL
DALPEGTAADDWFMDYRNADGSIAEMCGNGVRVFAHYLTAHGLENRSEFVVGSRAGGKPV
VVHESGPVVGEVTVDMGVVRTLGESTATLDGRVYPGLGIDVGNPHLACVDPHLTDTALAA
LDLSAPGFDPGFFPHGVNIEFLTPISSGVVHMRVHERGVGETRSCGTGTVAAAAAALRFD
GATDGAVRVQIPGGAVQVCIENGRAWLRGPSVLVATGTIDDDWWSAQA
NT seq 867 nt   +upstreamnt  +downstreamnt
atggagttcagcaaagggcacggcaccgagaacgacttcgtcatcctcccggatcccgat
gcccggctggacctcgacgcgccccggatcgcggcgctgtgcgaccggcgccgcggactc
ggcgccgacggcctgctccgcgtcgccagggccggcgccctcgtcgccgccggagtgctc
gacgcgctgcccgagggcaccgccgcggacgactggttcatggactaccgcaacgccgac
ggctccatcgcggagatgtgcggcaacggcgtgcgggtgttcgcgcactatctcaccgca
cacggcctcgagaaccgatccgagttcgtcgtcggcagccgcgccggcggcaagcccgtc
gtcgtccacgagtccggcccggtggtcggcgaggtcaccgtggacatgggtgtggtgcgc
acgctcggcgagtccaccgcgaccctcgacggccgtgtctatcccggtctcggcatcgac
gtcggcaacccgcatctggcctgtgtcgacccgcacctgaccgacaccgcgctggcggcc
ctcgatctgagcgcaccgggcttcgatcccggtttcttccctcacggcgtcaacatcgag
ttcctgaccccgatctcctccggcgtcgtccacatgcgggtccacgagcgcggtgtgggg
gagacccgctcgtgcggcaccggcaccgtcgccgccgcggccgccgcactgcgcttcgac
ggcgccaccgacggggccgtgcgcgtgcagatccccggcggtgcggtccaggtgtgcatc
gagaacggccgtgcctggctgcgcggcccgtcggtgctggtcgcgaccggcacgatcgac
gacgactggtggtcggcacaggcgtga

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