Rhodococcus sacchari: OED52_09020
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Entry
OED52_09020 CDS
T10960
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
rsf Rhodococcus sacchari
Brite
KEGG Orthology (KO) [BR:
rsf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsf03021
]
OED52_09020
Transcription machinery [BR:
rsf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OED52_09020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
UYP20637
LinkDB
All DBs
Position
complement(1970863..1971825)
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AA seq
320 aa
AA seq
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MARPETTTRFDSDLDGQSPAADLVRVYLNGIGRTALLTAEDEVELAKRIEAGLYAKHLLE
TKKRLSPAKKRDLAIIVRDGQAARSHLLEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGL
IRAMEKFDYAKGFKFSTYATWWIRQAITRGMADQSRTIRLPVHLVEQVNKLARIKRELHQ
QLGREATDEELSAESGIPVEKIADLLDHSRDPVSLDMPVGNDEEAPLGDFIEDAEATSAE
TAVIAGLLHSDVRSVLATLDEREQQVIRLRYGLDDGQPRTLDQIGKLFGLSRERVRQIER
EVMSKLREGERAERLRAYAS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcacgccccgaaaccaccacccgcttcgattccgacctcgacggccagagccccgca
gccgatctcgttcgcgtctacctgaacggcatcggacgcacggcgctgctgacggcggag
gacgaggtggagctggccaagcggatcgaggcaggcctgtacgccaagcatctgctggag
accaagaagcgcctgtccccggcgaagaagcgtgacctcgcgatcatcgtccgcgacggt
caggccgcccgcagccacctgctggaggccaacctgcgtctcgtcgtctccctcgccaag
cgctacacgggccgcggcatgccgctgctggacctcatccaggagggcaacctgggcctg
atccgcgccatggagaagttcgactacgccaagggcttcaagttctcgacctacgccacc
tggtggatccggcaggccatcacccgcggtatggccgaccagagccgcacgatccggctc
cccgtccacctcgtggaacaggtcaacaagctggcccgcatcaagcgtgagctgcaccag
cagctcggccgcgaggccaccgacgaggagctgtcggccgagtcgggcatcccggtcgag
aagatcgccgacctgctcgatcacagccgcgacccggtgagcctcgacatgccggtcggc
aacgacgaggaggccccgctgggcgacttcatcgaggacgccgaggccacctccgccgag
accgcggtcatcgccgggctgctgcacagcgacgtccgcagcgtgctggcgaccctcgac
gagcgcgagcagcaggtcatccggctgcgctacggcctcgacgacggccagccccgcacc
ctcgaccagatcggcaagctgttcggtctgtcgcgtgagcgggtccgccagatcgaacgc
gaagtgatgtccaagctccgcgaaggcgagcgcgccgagcgccttcgcgcctacgccagc
tga
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