Rhodococcus sacchari: OED52_09075
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Entry
OED52_09075 CDS
T10960
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
rsf Rhodococcus sacchari
Brite
KEGG Orthology (KO) [BR:
rsf00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OED52_09075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsf03021
]
OED52_09075
Transcription machinery [BR:
rsf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OED52_09075
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
HTH_20
DUF4193
Mo25
Motif
Other DBs
NCBI-ProteinID:
UYP20647
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All DBs
Position
complement(1981875..1983242)
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AA seq
455 aa
AA seq
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MAATDIHTADSSPESAPVADASGVANAADSTAGTAPSAKPAKKAAAKKAPAKKAAAKKSP
AKKTAAKKTAKKAAAKKSTKAAGAGEDDFDAADEADLADLDISEGDLAVEEVVVEDDEPS
EKDKASGDFVWDEEESEALRQARKDAELTASADSVRAYLKQIGKVALLNAEEEVELAKRI
EAGLYATHLLQQYAEKGEKLPVAQRRDLNWICRDGNRAKNHLLEANLRLVVSLAKRYTGR
GMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMV
EVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGDS
QLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLETLSEREAGVVRLRFGLTDGQPRTLDEIG
QVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
gtggcagccaccgacatccacaccgctgattcctcccccgaatcggcacccgttgcggac
gcttcgggcgtcgccaacgctgcggactccacggcaggcaccgcaccgagtgcgaagccg
gcgaagaaggccgcagccaagaaggcccccgccaagaaggccgcagccaagaagtcgcct
gccaagaagaccgctgcgaagaagaccgccaagaaggccgcagccaagaagtccaccaag
gccgcaggcgccggtgaggacgatttcgacgccgccgacgaggccgatctcgccgatctc
gacatctccgagggcgatctcgccgtcgaggaggtcgtggtcgaggacgacgagcccagc
gagaaggacaaggcctccggcgacttcgtctgggacgaggaggagtccgaggcgctgcgg
caggcccgcaaggacgccgagctcaccgcctcggccgactcggtccgcgcctacctcaag
cagatcggcaaggtcgccctcctcaacgccgaggaggaggtcgagctggccaagcgcatc
gaggccggcctgtacgcgacccacctgctccagcagtacgcggagaagggcgagaagctc
cctgtcgcgcagcgccgtgacctgaactggatctgccgcgacggcaaccgcgccaagaac
cacctgctcgaggcgaacctccgtctcgtggtctcgctcgccaagcgctacaccggccgc
ggcatggcgttcctggacctcatccaggaaggcaacctcggtctgatccgcgcggtcgag
aagttcgactacaccaagggttacaagttctcgacctatgccacctggtggatccgtcag
gccatcacccgcgccatggccgaccaggcccgcaccatccgtatcccggtgcacatggtc
gaggtcatcaacaagctcggtcgcatccagcgcgaactcctccaggatctgggccgcgag
cccacgccggaggaactcgccaaggaaatggacatcacgccggagaaggtgctggagatc
cagcagtacgcgcgtgagcccatctccctcgaccagaccatcggcgacgagggcgacagc
cagctcggcgacttcatcgaggactccgaggcggtcgtggccgtcgacgcggtctccttc
accctgctgcaggaccagctgcagtcggtgctcgagaccctgtccgaacgcgaggccggc
gtcgtccgtctgcgcttcggtctcaccgacggtcagccgcgcactctcgacgagatcggc
caggtctacggcgtgacgcgtgagcgcatccgccagatcgagtcgaagaccatgtcgaaa
ctgcgccacccgtcgcggtcgcaggtgctgcgcgactacctcgactga
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