Rhodococcus sacchari: OED52_09315
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Entry
OED52_09315 CDS
T10960
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
rsf Rhodococcus sacchari
Pathway
rsf00750
Vitamin B6 metabolism
rsf01100
Metabolic pathways
rsf01240
Biosynthesis of cofactors
Module
rsf_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
rsf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
OED52_09315 (pdxS)
Enzymes [BR:
rsf01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
OED52_09315 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
IGPS
NMO
Glu_synthase
TetR_C_27
DHO_dh
FMN_dh
Motif
Other DBs
NCBI-ProteinID:
UYP20687
LinkDB
All DBs
Position
2028607..2029509
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AA seq
300 aa
AA seq
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MSTPDTAPATGTARVKRGMAEMLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVPADIRA
QGGVSRMSDPDMIEGIIEAVSIPVMAKARIGHFVEAQILQALGVDYIDESEVLTPADYEN
HIDKFAFTVPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSNATTHMRRIRQEIRRL
TSLPEDELYVAAKELQAPYDLVVEIARTGKLPVTLFTAGGIATPADAAMMMQLGAEGVFV
GSGIFKSGNPAQRAAAIVKATTFYDDPDVLAKVSRGLGEAMVGINVDEIPQPHRLAERGW
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacccccgacaccgcccccgccaccggtaccgcccgcgtcaagcgcggcatggcc
gagatgctcaagggcggggtgatcatggacgtggtgacccccgagcaggcgaagatcgcc
gaggatgccggcgcggtcgccgtcatggccctcgaacgcgtgcccgccgacatccgcgcc
cagggcggcgtgtcgcggatgagcgaccccgacatgatcgaggggatcatcgaggccgtc
tccatccccgtcatggccaaggcccggatcggccacttcgtcgaggcgcagatcctgcag
gcgctcggcgtcgactacatcgacgagtcggaggtgctcacccccgccgactacgagaac
catatcgacaagttcgccttcaccgtgccgttcgtctgcggcgccaccaacctcggcgag
gcgctgcgccgcatcaacgagggcgcggcgatgatccgctccaagggtgaggccggcacc
ggcgacgtctccaacgccaccacccacatgcgccggatccgccaggagatccgccgcctg
acgtcgctgccggaggacgagctctacgtcgcggccaaggagttgcaggccccctacgac
ctcgtcgtcgagatcgcccggaccgggaagctgccggtcacgctgttcaccgccggtggc
atcgccaccccggccgacgccgcgatgatgatgcagctcggcgccgagggcgtgttcgtc
ggctccggcatcttcaagtccggcaatcccgcccagcgggccgcggcgatcgtcaaggcc
accaccttctacgacgatccggacgtgctggcgaaggtctcgcgcggtctcggcgaggcc
atggtcgggatcaacgtcgacgagatccctcagccgcaccggctcgccgaacgcggctgg
tga
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