Rhodococcus sacchari: OED52_13025
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Entry
OED52_13025 CDS
T10960
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rsf Rhodococcus sacchari
Pathway
rsf00470
D-Amino acid metabolism
rsf00550
Peptidoglycan biosynthesis
rsf01100
Metabolic pathways
rsf01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rsf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OED52_13025
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OED52_13025
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
OED52_13025
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rsf01011
]
OED52_13025
Enzymes [BR:
rsf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
OED52_13025
Peptidoglycan biosynthesis and degradation proteins [BR:
rsf01011
]
Precursor biosynthesis
Amino acid ligase
OED52_13025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_3
CPSase_L_D2
ATP-grasp_4
RimK
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
UYP17608
LinkDB
All DBs
Position
complement(2854256..2855362)
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AA seq
368 aa
AA seq
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MSTPRTRVAVVFGGRSNEHSVSCISAGSILRNLDPEKYEVVPIGITPEGAWVLGNTDPAN
LTAAGRELPVVDGTGADLVLTADPTRRGDIVALDEGAYGSVLASVDVVFPVLHGAYGEDG
TIQGLLELADIPYVGPGVLASAAGMDKEFTKKLLAAEGLPVGFQIVMRPGVETLTEEQKE
RLGLPVFVKPARGGSSIGISRVADWAAFDGAVAKAREHDPKVIVESAIIGREVECGVLEF
PDGDVRASVVAEIRMPDTSGDHEAFYDFDTKYIDDVCEFDVPAKLDEDISDRIRELAVRA
FRALDCHGLSRVDFFVTEDGPVINEINTMPGFTSISMYPRMWQAAGIEYSELLSILVETA
LARGTGLR
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacgccccgcaccagggtggccgtcgtcttcggtggccgcagcaacgagcattcc
gtgtcctgcatctccgcaggcagcatcctgcgcaatctggacccggagaagtacgaggtc
gtgcccatcggtatcacccccgagggcgcatgggtcctcggcaacacggatccggcgaac
ctgaccgccgccggccgcgaactgcccgtcgtcgacggcaccggcgccgatctggtcctg
accgcggatcccacccgccgcggcgacatcgtcgccctcgacgaaggcgcctacggctcc
gtgctcgcctcggtcgacgtggtcttcccggtcctgcacggcgcctacggcgaggacggc
accatccagggcctgctcgaactcgccgacatcccctacgtgggtcccggtgtgctcgcc
agcgccgccggcatggacaaggagttcaccaagaagctcctcgcggccgagggtctgccc
gtcggcttccagatcgtcatgcgcccgggcgtcgagaccctcaccgaggagcagaaggaa
cggctgggcctgcccgtcttcgtcaagccggctcgcggcggctcgtcgatcggcatcagc
cgcgtggcggactgggcagccttcgacggcgcagtcgccaaggcccgcgaacacgacccc
aaggtcatcgtcgagtccgcgatcatcggccgcgaggtcgagtgcggcgtcctcgagttc
ccggacggcgacgtgcgtgccagcgtcgtcgcggagatccgcatgcccgacacctcgggc
gaccacgaggccttctacgacttcgacaccaagtacatcgacgacgtgtgcgagttcgac
gtccccgcgaagctggacgaggacatctccgaccgcatccgcgaactcgcggtgcgggcc
ttccgggcactcgactgccacggcctgtcgcgggtggacttcttcgtcaccgaggacggc
ccggtgatcaacgagatcaacacgatgcccggcttcacctcgatctcgatgtatccgcgg
atgtggcaggcggccggcatcgagtactccgagctgctgtcgatcctcgtcgagacggcg
ctcgcgcggggtaccggcctgcgctga
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