Rhodococcus sacchari: OED52_14000
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Entry
OED52_14000 CDS
T10960
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rsf Rhodococcus sacchari
Pathway
rsf03420
Nucleotide excision repair
rsf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OED52_14000
03430 Mismatch repair
OED52_14000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsf03400
]
OED52_14000
Enzymes [BR:
rsf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OED52_14000
DNA repair and recombination proteins [BR:
rsf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OED52_14000
MMR (mismatch excision repair)
Other MMR factors
OED52_14000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Zn_Ribbon_TF
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
UYP21055
LinkDB
All DBs
Position
complement(3039264..3041411)
Genome browser
AA seq
715 aa
AA seq
DB search
MMEAMCAESVVDGLDPEQAAAVLAPRGPVCVLAGAGTGKTRTITRRIAHLVSTGHVKASQ
VLAVTFTARAAGEMRSRLRELGIGGDGTQVQARTFHAAALRQLRYFWPQVVGDTPWQLLD
RKFAAVSQAAHRCGFATDTDTVRDLLSEIEWAKGTLIAPEDYPAAAARARRTPPADPERV
ARVYSTYETLKVRSGEGMYLDFDDLLLHTAAALEDNAAVAEEFRDRYRCFVVDEYQDVTP
LQQRVLDAWLGDRDDLTVVGDANQTIYSFTGASPKYLLDFSRRFPDATVVRLERDYRSTP
QVVDLANRVIGAARGRIAGTRLELVGQRPPGPEPTFAEFDDEPAEAQAVAKAVAKLMGKG
VPASEIAVLYRINAQSEVYEQAFTEAGIPYQVRGGEGFFQRAEVRQAVNALRQVAARDDL
PEDADRGSNLLSLVRASLVPLGLSDTEPDGAQARERWASLVALVQLTEELLEHEPELTLE
MLLRELAARAEARQPPTVQGVTLASLHAAKGLEWDAVFLVGLTDGTLPISHVLGDKETPP
DQAGVEEERRLLYVGVTRARVHLQLSWALSRTQGGRRSRRRSRFLHGLVPDSSPASKIAE
PASSKKKRPQCRICGKPLLGTTATMLGRCEGCPSNLDENLLVALKEWRRERSKEMKVPAY
VVFSDNTLVAIAEQQPRDDRALVKIPGIGAKKLEQYGADVLALVRGERTVDTLDI
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggccatgtgtgcggagtcggtggtggacggtctggatccggaacaggcggca
gcggtactcgccccccgcggaccggtctgcgtgctcgccggagccggcaccggcaagacc
cgcaccatcacccgccgcatcgcccacctcgtctccaccggccacgtcaaagcgagccag
gtcctcgccgtcaccttcacagcccgcgcggcgggggagatgcggtcccggctccgtgag
ctcggcatcggtggcgacggcacgcaggtgcaggcccgcaccttccacgccgcggcgctg
cggcagctgcgctacttctggccgcaggtcgtcggcgacaccccttggcagctcctcgac
cgcaagttcgccgcggtctcccaggccgcccaccgttgcgggttcgccaccgacaccgac
accgtgcgcgacctgctctcggagatcgagtgggcgaagggcactctcatcgcccccgag
gactatccggccgcggcggcccgcgcccgtcgcacacccccggccgatcccgaacgggtc
gcccgtgtgtactcgacctacgagacgctcaaggtccggtcgggcgagggcatgtacctc
gacttcgacgacctgctcctgcacaccgccgccgcactcgaggacaacgcggccgtggcg
gaggagttccgcgaccgctaccgctgcttcgtcgtcgacgagtaccaggacgtcacgccg
ttgcagcagcgggtgctcgacgcctggctcggcgaccgcgacgacctgacggtggtcggc
gacgccaaccagaccatctactcgttcaccggagcctccccgaagtatctgctcgacttc
tcccgccggttccccgacgcgacggtggtgcgcctcgaacgcgactaccggtccaccccg
caggtggtcgacctcgccaaccgggtcatcggcgccgcccgcggccgtatcgccggcacc
cggctcgagctcgtcggtcagcgcccgcccggcccggagccgaccttcgcggagttcgac
gacgaaccggccgaggcgcaggccgtggcgaaggcggtcgcgaagctgatgggcaagggc
gtgcccgcctcggagatcgcggtgctgtaccggatcaacgcccagtcggaggtctacgag
caggcgttcaccgaggccggcatcccctatcaggtgcgcggcggcgagggtttcttccag
cgtgcggaggtgcggcaggcggtcaatgcgctgcgtcaggtcgccgcccgcgacgacctg
cccgaggacgccgaccgcggcagcaacctgctctcgctcgtgcgtgcctccctcgtgccg
ctcggcctgagcgacaccgaacccgacggtgcgcaggcgcgggaacgctgggcgtcgctc
gtcgcgctcgtgcagctcaccgaagaacttctcgagcacgaacccgagctcactctcgag
atgctgctgcgcgaactagcggcccgcgccgaggcccggcagccaccgaccgtgcagggc
gtgaccctcgcgtcgctgcacgccgcgaagggcctcgaatgggacgcggtgttcctcgtc
gggctcaccgacggcaccctgccgatcagccacgtcctcggcgacaaggagaccccgccc
gaccaggcgggcgtcgaggaggagcggcggttgctgtacgtcggggtcacccgcgcgcgg
gtgcacctgcagttgtcgtgggcgctgtcgcgcacccagggcggtcgccggtcgcggcgc
cgctcccggttcctgcacggcctcgttcccgacagttcaccggcgtcgaagatcgccgag
ccggcctcgtcgaagaagaagcggccgcagtgccggatctgcggcaagccgctgctcggc
accacggcgacgatgctcggccgctgcgagggctgcccgtcgaatctggacgagaacctg
ctcgtcgcgctgaaggagtggcgccgggagcggtccaaggagatgaaggtcccggcctac
gtggtgttcagcgacaacacgctcgtcgcgatcgccgagcagcagccgcgcgacgatcgg
gcgctggtgaagatcccgggtatcggggcgaagaagctcgagcagtacggcgccgacgtg
ctggctctggtgcggggggagcgtaccgtcgacaccctcgacatctga
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