Rhodococcus sacchari: OED52_14640
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Entry
OED52_14640 CDS
T10960
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rsf Rhodococcus sacchari
Pathway
rsf00020
Citrate cycle (TCA cycle)
rsf00190
Oxidative phosphorylation
rsf00650
Butanoate metabolism
rsf00720
Other carbon fixation pathways
rsf01100
Metabolic pathways
rsf01110
Biosynthesis of secondary metabolites
rsf01120
Microbial metabolism in diverse environments
rsf01200
Carbon metabolism
Module
rsf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rsf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rsf_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rsf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
OED52_14640 (sdhA)
00650 Butanoate metabolism
OED52_14640 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
OED52_14640 (sdhA)
00720 Other carbon fixation pathways
OED52_14640 (sdhA)
Enzymes [BR:
rsf01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
OED52_14640 (sdhA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Thi4
DAO
Pyr_redox_2
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
UYP17898
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Position
3173915..3175666
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AA seq
583 aa
AA seq
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MQEHRYDVVIVGAGGAGMRAAIEAGPRARTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTVKGGDYLVDQDAAEIMAKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT
RDHGKAPVRRACYAADRTGHMILQTLYQNCVKHDVEFFNEFYALDIALTETDEGPVATGV
IAYELATGEIHVFHAKSIVFATGGSGRMYKTTSNAHTLTGDGLGIIFRKGLPLEDMEFHQ
FHPTGLAGLGILISEAVRGEGGILRNADGERFMERYAPTIKDLAPRDIVARSMVLEVLEG
RGAGPNKDYVYIDVTHLGEDVLEEKLPDITEFSRTYLGVDPVTELVPVYPTCHYVMGGIP
TTVNGEVLRNNTEIVKGLYAAGECACVSVHGANRLGTNSLLDINVFGRRAGIAAAEYANG
TKHVPLPETPTKYVDEWLDLILHQGGKERVADIRAELQQSMDNNASVFRTEETLTQALND
IHALKKRYKEITVHDKGKRYNSDLLEALELGFLLEMAEVTVVGALNRKESRGGHAREDYP
KRDDENFLKHTMAYKVGEDLISDIRLDYKPVVQTRYEPMERKY
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaacatcgttacgacgtagtcatcgtcggcgccggcggcgccggcatgcgtgcg
gccatcgaagcgggcccgcgtgctcgcacggcggtgctcaccaagctctacccgacgcgc
agccacaccggcgcggcccagggcggcatgtgcgccgcgctggcgaacgtcgaggaagac
aactgggagtggcacaccttcgacaccgtcaagggtggtgactacctggtcgaccaggac
gccgcggagatcatggccaaggaggccatcgacgccgtcctcgacctcgagaagatgggc
cttccgttcaaccggacgcccgagggcaagatcgaccagcgtcgcttcggtggccacacc
cgcgaccacggcaaggccccggtccgtcgcgcgtgctacgccgccgaccgcacgggtcac
atgattctgcagaccctctaccagaactgcgtcaagcacgacgtcgagttcttcaacgag
ttctacgcgctcgacatcgcgctcaccgagaccgacgagggcccggtcgcgaccggcgtc
atcgcctacgaactcgccaccggtgagatccacgtcttccacgcgaagtccatcgtcttc
gcgacgggcggctcgggccgcatgtacaagacgacgtcgaacgcccacaccctcaccggt
gacggcctcggcatcatcttccgcaagggtctgccgctggaggacatggagttccaccag
ttccatccgacgggcctggccggtctcggcatcctcatctcggaggccgtgcgcggtgag
ggcggcatcctccgcaacgccgacggcgagcggttcatggagcgctacgcccccaccatc
aaggacctcgcgccgcgcgacatcgtcgcccgctcgatggtgctcgaggtgctcgagggc
cgcggtgccggaccgaacaaggactacgtctacatcgacgtgacccacctcggcgaggac
gtcctcgaggagaagctcccggacatcaccgagttctcccgcacctacctgggtgtcgac
ccggtcaccgagctcgtgccggtctacccgacctgccactacgtcatgggcggtatcccc
accaccgtcaacggcgaggtgctccgcaacaacaccgagatcgtcaagggcctgtacgcc
gccggtgagtgcgcgtgcgtgtccgtccacggcgcgaaccgcctgggcaccaactcgttg
ctcgacatcaacgtgttcggccgccgcgccggcatcgctgccgccgagtacgcgaacggc
accaagcacgtgccgctgccggagacgccgacgaagtacgtcgacgagtggctcgatctc
atcctgcaccagggcggcaaggagcgggtggccgacatccgcgccgagctgcagcagtcg
atggacaacaacgcctcggtgttccgcaccgaggagacgctgacccaggcgctcaacgac
atccacgcgctgaagaagcgctacaaggagatcacggtccacgacaagggcaagcgctac
aacagcgacctgctcgaggccctggagctcggcttcctcctggagatggccgaggtcacg
gtcgtcggtgcgctcaaccgcaaggagtcgcgtggcggtcacgcccgcgaggactacccg
aagcgcgacgacgagaacttcctcaagcacaccatggcgtacaaggtgggcgaggacctc
atctccgacattcgcctggactacaagccggtggtccagacccggtacgagcccatggag
cgtaagtactga
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