Rhodococcus sacchari: OED52_16340
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Entry
OED52_16340 CDS
T10960
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
rsf Rhodococcus sacchari
Brite
KEGG Orthology (KO) [BR:
rsf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsf03021
]
OED52_16340
Transcription machinery [BR:
rsf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OED52_16340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_3
MarR
HTH_Crp_2
MarR_2
HTH_24
DUF7343
HTH_31
HTH_23
Sigma70_ECF
HTH_20
HTH_ParB
LacI
HTH_Tnp_4
HTH_AraC
HTH_IclR
KORA
Motif
Other DBs
NCBI-ProteinID:
UYP18212
LinkDB
All DBs
Position
3565265..3566047
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AA seq
260 aa
AA seq
DB search
MTRNAGRSSDEYADVTETLRTLLALPEGDPGRIRIRDQVVERCLPLAEHIARRFDGRGEA
FEDLLQVARLGLVNAVDRFDPERGSDFVSFAVPTIMGEVRRHFRDAGWAVRVPRRMKELH
LSLSKATSELSQQLGRAPTASELAEVLGIDQEEVLQGLVAGNAYQTVSVDRSSPSGDDGL
TLADTLGEYDAALDEVENHEALRPLLEALPARERTVVLLRFFGNMTQTQIAERVGVSQMH
VSRLLTKTLAQLREQLGENF
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgcaatgccggcaggtcgagcgacgagtacgccgacgtcaccgagacactgaga
accctcctcgcccttccggagggcgaccccggacgcatccgcatccgcgaccaggtggtc
gagcggtgcctgccgctggccgagcacatcgcgcgccgattcgacggtcgcggtgaggcg
ttcgaggatctgctgcaggtggcgcggctggggttggtgaacgccgtggaccgcttcgac
ccggagcggggatcggacttcgtgtcgttcgccgtgcccacgatcatgggtgaggtgcgc
cggcacttccgcgacgccggctgggccgtgcgagtgccgcggcgcatgaaggaactgcac
ctgtcgctgagcaaggccacctccgagctgtcccagcaactcgggcgcgcccccaccgcc
tccgaactggccgaggtgctcggcatcgatcaggaggaggtcctgcaggggctcgtggcc
ggcaacgcctatcagacggtgtcggtggaccggtcgtccccgtcgggcgacgacgggctg
accctggccgacaccctcggcgagtacgacgcggccctcgacgaggtggagaaccacgag
gctctgcgtccgctgctcgaggcgctgcccgcccgcgaacgcacggtcgtgctgctgcgt
ttcttcgggaacatgacgcagacgcagatcgccgagcgagtcggggtgtcgcagatgcac
gtctcgcgtctactcaccaagaccctcgcgcagctgcgcgaacagctgggcgagaacttc
tag
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