Rhodococcus sacchari: OED52_16690
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Entry
OED52_16690 CDS
T10960
Name
(GenBank) AAA family ATPase
Organism
rsf Rhodococcus sacchari
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_5
AAA_16
AAA_22
AAA_14
AAA_30
ATPase_2
NACHT
AAA_33
AAA_28
TsaE
Viral_helicase1
AAA_18
AAA_24
AAA_25
RuvB_N
ABC_tran
Rad17
RNA_helicase
CDC48_2
nSTAND3
Adeno_IVa2
NTPase_1
NPHP3_N
ATP_bind_1
IstB_IS21
T2SSE
Mg_chelatase
AAA_2
ORC-CDC6-like
AFG1_ATPase
Motif
Other DBs
NCBI-ProteinID:
UYP18281
LinkDB
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Position
3642837..3645020
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AA seq
727 aa
AA seq
DB search
MTTRQLALTVRLNTSAADSRRGVVRLHPEALTALGLREWDGIALVGARRTAAVAGYAPAG
TPTGTILLDDVVLSNTGLREDATVVVEPVTVHGARTVTVTGSALARQSIPETTLRQALLG
KVLTVGDAVSLLPRDLGPGTSNAETTRALSRTFAVAWTTELLTVAAVDPAGPVSVQPNTA
VVWGGAGVPLVSSPAPTPTPAYAPAPEQAGPPAPAVEDLVGVQAQVAKLTEWLTLSLDEP
ELLRTLNASPHLGVLVTGPAGVGKATFVRSVVAGRRLVEVDGPSVGALAAEDRLRRVSAA
AETVRSGGILLLTDVDALLPADADPVATLILDELRRVVDTDGAVLIATTAHPDDVDPRLR
VPEICDRELSLPLPDGATRRALLDVLLRSVPADGLDLTAVAGRTPGFVAADLAALCREAA
LRAASRASRESEDPVLTQDDLIGALGVIRPLSRSGTEELAIGSVSLDDVGDMVETKQALT
EAVLWPLQHPDSFARLGVDPPRGVLLYGPPGCGKTYLVRALAGTGRLSVHAVKGAELMDK
WVGASEKAVRELFQRARNSAPALVFLDEVDALAPRRGQSSDSGVSDRVVAALLTELDGVE
PLRDVVVVGATNRPDLIDPALLRPGRLERLVFVPPPDEEARAEILRTAGRSVPLAEDVDL
AALAADLDGYSAADCSALLREAALAAMRRHVDAAVVTAEDVAVAREKVRPSLDPVQVAHL
QAYAEGR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacccgacaactcgcgctgaccgtccgactcaacacgtccgccgccgattcccga
cgcggggtcgtccgcctccaccccgaggcgctcaccgccctgggcctgcgggaatgggac
ggcatcgcgctggtgggggcgcggcgcaccgcggcggtcgccgggtacgctccggccggc
accccgaccggcacgatcctgctcgacgacgtggtgctgtccaacaccggtctgcgggag
gacgccaccgtggtcgtcgaacccgtcaccgtccacggcgcccgcaccgtcaccgtcacc
ggctccgctctcgcgcgccagtcgatccccgagaccaccctgcggcaggcgctgctcggc
aaggtcctcaccgtaggcgatgcggtgtcgctgctgccgcgcgatctcggtcccggcacc
agcaacgccgagacgacgcgcgctctgtcgcggaccttcgcggtcgcgtggaccaccgaa
ctgctcacggtcgccgccgtcgatcccgccggtccggtcagcgtccagccgaacaccgcg
gtggtctggggcggtgccggcgtgccgctcgtctcctcccccgctcccacgcccaccccg
gcctacgcaccggcgccggagcaggccggcccaccagcgcccgccgtcgaggatctcgtc
ggggtgcaggcgcaggtcgccaagctcaccgagtggctgacgctgtccctcgacgaaccc
gaactgctgcgcaccctcaacgcctccccgcacctgggggtgctggtcaccggcccggcc
ggggtcggcaaggcgaccttcgtccgctcggtggtcgccgggcgccgtctcgtcgaggtc
gacggcccgagcgtcggagccctcgccgccgaggaccggctgcggcgggtctcagctgcg
gccgagaccgtccgcagcggcgggatcctgctgctcaccgacgtcgacgcgctcctgccc
gcggacgccgatccggtcgcgacgctgatcctcgacgagctgcggcgcgtcgtcgacacc
gacggtgcggtgctgatcgcgaccaccgcgcatcccgacgacgtcgacccccggctgcgc
gtccccgagatctgcgaccgcgaactgtcgctgccgctgcccgacggcgccacccgccgg
gccctgctcgacgtgctactgcgctccgtcccggccgacggcctcgacctcaccgccgtc
gccgggcgcacccccggtttcgtcgccgccgacctcgccgcgctgtgccgcgaggccgcg
ctgcgggcggcgtcccgcgcgagccgcgagtcggaggaccccgtcctcacgcaggacgac
ctgatcggggcactcggggtgatccggccgctgtcccgctccggcaccgaagagctggcc
atcggcagcgtgagtctcgacgacgtcggcgacatggtcgagaccaagcaggccctcacc
gaggcggtgctgtggccgctgcagcatcccgactcgttcgcccggctcggcgtcgacccg
ccgcgcggggtgctgctctacggcccgcccggttgcggcaagacctatctggtgcgggcg
ctcgccggcaccgggcgcctgagcgtccacgccgtcaagggcgccgagctgatggacaag
tgggtcggtgcctccgagaaggcggtgcgcgagctgttccagcgtgcccgcaactccgca
cccgccctcgtcttcctcgacgaggtcgacgccctcgcgccgcgccgcggccagagctcg
gactcgggggtgtccgaccgggtggtcgccgcgctgctgaccgagctcgacggtgtcgaa
ccgttgcgcgacgtcgtggtggtgggtgcgacgaaccgccccgacctgatcgacccggcc
ctgctgcgtcccggccggctcgagcggctggtgttcgtgccgccgccggacgaggaggcg
cgcgcggagatcctgcggaccgccgggcggtcggtgccgctcgccgaggacgtcgacctc
gccgccctggccgccgacctcgacggctattcggcggcggactgctcggcgctgctgcgg
gaggccgccctcgccgcgatgcggcggcacgtcgacgccgcggtggtcaccgccgaggac
gtcgccgtcgcccgcgagaaggtgcggccgtcgctggatccggtgcaggtcgcgcacctg
caggcgtacgcggagggccgctga
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