KEGG   Rhodococcus sacchari: OED52_19960
Entry
OED52_19960       CDS       T10960                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
rsf  Rhodococcus sacchari
Pathway
rsf00061  Fatty acid biosynthesis
rsf00071  Fatty acid degradation
rsf01100  Metabolic pathways
rsf01212  Fatty acid metabolism
rsf02024  Quorum sensing
rsf04146  Peroxisome
Module
rsf_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rsf00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    OED52_19960
   00071 Fatty acid degradation
    OED52_19960
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    OED52_19960
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    OED52_19960
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rsf01004]
    OED52_19960
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rsf04147]
    OED52_19960
Enzymes [BR:rsf01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     OED52_19960
Lipid biosynthesis proteins [BR:rsf01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   OED52_19960
Exosome [BR:rsf04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   OED52_19960
  Exosomal proteins of breast cancer cells
   OED52_19960
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: UYP18874
LinkDB
Position
complement(4370555..4372216)
AA seq 553 aa
MNSRPDWVNRTLSYPATSMAVWTPSLAAVYGDRPAVIDGDRVLSFRELDERSAQFAGALR
ESGVRERDVVLLHLGNCVDFHIAYYGALRVGAAVTLVNPLQPEPGLRRQIEETAAVAAVT
QPEQFGTLASAAAGTTVGLIAVVSDTPVEASAPGVVRFADLLDGRPTAFEPAAVSGDDVA
HIAYTGGTTGISKGVRVLHRNVIGNVTQMCAWRAGHQLVADEDGLVSLEKIDDLDIAGVV
PGQGSTIVVSPLFHAHALINTSFLLACGLTQVLAGRFDPARMLVLIEQYEASYITGSPAM
WHALATHPDVETRDLSTVRVVSSGAAPIDHVTLENLQRAFPNARVAEGYGLTEGTCVVTA
MPLVVDSDYRLGSVGLPVFDTEIEIRSQTDPSVVLGAGERGEIWIKGPQVTDGYLGHPEI
TAEQYVDGWLATGDIAYRDADGFVYIADRAKDMLIYKGYNVYPRELEEILVTHPQVSTAA
VVGRDAGAVGQEPVAFVVPVEGSDPDEDELKSYVAERVLPYKKIREVVLVDALPTSAAGK
ILKTDLRSRLTVS
NT seq 1662 nt   +upstreamnt  +downstreamnt
atgaattcccgtccggactgggtgaatcggacgctgtcctatccggcgacgtcgatggcg
gtgtggacgccgagccttgccgccgtctacggcgaccggcccgccgtcatcgacggcgac
cgggtcctgagcttccgtgaactcgacgagcgttcggcgcagttcgccggtgcactccgc
gaatcgggtgtgcgcgaacgcgacgtggtgctgctgcatctcggcaactgtgtcgacttc
cacatcgcctactacggtgcgctgcgcgtgggcgccgcggtcaccctcgtcaacccgctg
cagcccgaaccgggcctgcgccggcagatcgaggagaccgcggcggtcgcggcggtgaca
cagcccgagcagttcggcaccctggcgagcgccgcggccggtacgaccgtcggcctgatc
gccgtcgtctcggacaccccggtcgaggcgtccgccccgggtgtcgtgcggttcgccgac
ctgctcgacggccggcccaccgccttcgaaccggccgcggtgtccggcgacgacgtcgca
cacatcgcgtacaccggtggcaccaccggtatctcgaagggcgtgcgggtcctgcaccgc
aacgtcatcggcaacgtcacgcagatgtgcgcgtggcgcgccgggcaccagctcgtcgcc
gacgaggacggcctggtgtcgctcgaaaagatcgacgatctcgatatcgccggtgtggtc
ccggggcaggggtcgacgatcgtcgtgtccccgttgttccacgcgcacgcactgatcaac
acctcgttcctgctcgcgtgcggcctgacccaggtcctcgccggccggttcgatccggcg
cggatgctcgtgctgatcgagcagtacgaggccagctacatcacgggcagccccgcgatg
tggcacgcgctggccacccaccccgacgtcgagacgcgcgacctgagcaccgtgcgggtc
gtctcctcgggtgcggccccgatcgaccacgtgaccctcgagaacctgcagcgggcgttc
cccaacgcccgggtcgccgagggctacgggctgacggagggcacctgcgtcgtcacggcc
atgccgctcgtcgtcgactccgactaccggctcggcagcgtcggcctgccggtgttcgac
accgagatcgagatccgttcgcagaccgacccgtccgtcgtcctcggcgccggtgagcgc
ggcgagatctggatcaagggaccccaggtcaccgacggctacctcggccaccccgagatc
acggcggagcagtacgtcgacggctggctcgccaccggcgacatcgcctaccgcgacgcc
gacggtttcgtctacatcgccgaccgcgccaaggacatgctgatctacaagggctacaac
gtgtatccgcgtgagctcgaggagatcctggtgacccatccgcaggtgtccaccgccgcg
gtcgtcggccgggacgccggcgcggtcgggcaggagccggtcgcgttcgtggtccccgtc
gagggctcggacccggacgaggacgagctgaagtcctatgtggccgaacgcgtcctgccg
tacaagaagatccgtgaggtggtgctggtcgacgccctgccgacctccgccgcgggcaag
atcctcaagaccgatctgcgatcgcgtctgacggtttcctga

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