Ralstonia syzygii subsp. celebesensis: JK151_07480
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Entry
JK151_07480 CDS
T07219
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rsg
Ralstonia syzygii subsp. celebesensis
Pathway
rsg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JK151_07480 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsg03019
]
JK151_07480 (pcnB)
Enzymes [BR:
rsg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
JK151_07480 (pcnB)
Messenger RNA biogenesis [BR:
rsg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JK151_07480 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
TruB_C
DUF2204
Motif
Other DBs
NCBI-ProteinID:
QQV56762
LinkDB
All DBs
Position
complement(1600769..1602316)
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AA seq
515 aa
AA seq
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MIKKLINRLLGRPGAETAHATEPGTPAKKGRAPKTPKSRAKAAAGGVPRAPRVWNVEAHG
IDPKLLSRNAVKVTSTLQEAGYDAFIVGGAVRDLLLGIQPKDFDVATNATPEQVEALFRR
SRIIGRRFQIVHVTFYGGREQEIIEVSTFRALVDAVESEQVPAGKRVKRTELDHHTHAVD
ASGRVLRDNVWGTQAEDATRRDFTVNAMYYNPADQTVHDYHHGMEDMRARLLRMIGDPHT
RYREDPVRMLRVVRFAAKTGFDIDPATRAPIAELGPLIHNVPAARLFDEMLKLLMSGHAW
ASLQELRKAGLHSGLLPLLDVALEQPMGQRFVQLALDNTDERVKAGKPVSPGFLFASLMW
HHVLEHWNRRRTAGEPLIPALHTAMDEVLDRQTEQLAIQRRFTADMKEIWSMQPRFEKRT
GRMPYRLLELPRFRAGYDFLALRCASGELPQELATWWTDFQNGDGDAREALIAQAKQAPA
AAGGSTGGVKRRRRRRGPAKSDTVADVSPGSSEGT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaagaaactcatcaatcgcctgctgggcaggcccggcgcggaaaccgcgcacgcc
accgagcccggcacgccggccaagaagggccgcgcgcccaagaccccgaagtcgcgcgcc
aaggccgccgccggtggcgtaccgcgcgcgccccgcgtatggaacgtggaagcgcacggc
atcgatccgaaactgctgtcgcgcaacgccgtcaaggtcacttccacgctgcaggaagcc
ggctatgacgccttcatcgtgggcggcgcggtgcgcgatctgctgctgggcatccagccg
aaggacttcgacgtcgccaccaacgccacccccgagcaggtggaggcgctgttccgccgc
tcgcgcatcatcggccggcgcttccagatcgtgcacgtgacgttctatggcggacgcgag
caggaaatcatcgaggtctcgaccttccgcgcgctggtcgatgccgtggaaagcgagcag
gtgccggccggcaagcgcgtcaagcgcaccgagctggaccaccacacccacgccgtcgac
gccagcggccgcgtgctgcgcgacaacgtgtggggcacgcaggccgaggatgccacccgc
cgcgacttcaccgtcaacgcgatgtactacaacccggccgaccagaccgtgcacgactac
caccacggcatggaagacatgcgcgcgcgcctgctgcgcatgatcggcgacccgcacacg
cgctaccgcgaagacccggtgcgcatgctgcgcgtggtgcgcttcgcggccaagaccggt
ttcgacatcgacccggccacgcgcgcgccgatcgccgaactgggcccgctgatccacaac
gtgccggccgcgcggctgttcgacgagatgctcaagctgctgatgtcgggccacgcctgg
gcgtcgctgcaggagctgcgcaaggccggcctgcacagcggcctgctgccgctgctggac
gtggcgctcgaacagccgatgggccagcgcttcgtgcagttggcgctcgacaataccgat
gagcgcgtcaaggccggcaagccggtctcgcccggcttcctgttcgcctcgctgatgtgg
caccacgtgctggaacactggaaccgccgccgcaccgccggcgagccgctgatccccgcg
ctgcacacggcgatggacgaagtcctcgaccgccagaccgagcagctcgccatccagcgc
cgcttcaccgccgacatgaaggagatctggagcatgcagccgcgcttcgagaagcgtacc
ggccgcatgccctaccgcctgctggaattgccgcgcttccgcgccggctacgacttcctg
gccctgcgctgcgcctcgggcgaattgccgcaggagctcgccacctggtggaccgacttc
cagaacggcgacggcgacgcgcgcgaagcgctgatcgcgcaggccaagcaggcgccggcc
gcagccgggggttccaccgggggtgtcaagcgccgccgccgccggcgtggtccggcaaaa
tcggatacagtcgccgacgtgagcccgggcagttcggagggaacgtga
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