Ralstonia syzygii subsp. celebesensis: JK151_08535
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Entry
JK151_08535 CDS
T07219
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rsg
Ralstonia syzygii subsp. celebesensis
Pathway
rsg03030
DNA replication
rsg03430
Mismatch repair
rsg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JK151_08535 (dnaE)
03430 Mismatch repair
JK151_08535 (dnaE)
03440 Homologous recombination
JK151_08535 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsg03032
]
JK151_08535 (dnaE)
03400 DNA repair and recombination proteins [BR:
rsg03400
]
JK151_08535 (dnaE)
Enzymes [BR:
rsg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JK151_08535 (dnaE)
DNA replication proteins [BR:
rsg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JK151_08535 (dnaE)
DNA repair and recombination proteins [BR:
rsg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JK151_08535 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QQV54273
LinkDB
All DBs
Position
1833678..1837208
Genome browser
AA seq
1176 aa
AA seq
DB search
MNSPRFVHLRLHSEYSIVDGNVRLDEAVKAAAADGMGALALTDLANAFGLVRFYKEARGK
GVKPVVGADVWITNHDERDKPGRLLLLVRNKQGYLNLCMLLARAWLSNQHRGRAEIAPEW
FGEPGVEDAPLATGLLALSGAMGGDIGMALANGNEALARKLAAQWSSVFPEAFYIELQRA
GQAGTEAYVQRAVKLAASMHLPVVATHPVQFMTPDDFTAHEARVCIAEGDLLANPRRARR
FTTDQYFKTQDEMCALFADIPSALANAVQIAQRCNLTLELGKPKLPLFPTPDGMSLDDYL
AHLAKQGLEQRMEVLFPDPAVREAKRPEYYARLEFETGTIIKMGFPGYFLIVADFINWAK
NNGVPVGPGRGSGAGSLVAYALGITDLDPLKYNLLFERFLNPERVSMPDFDIDFCQHGRD
RVIHYVKEKYGKDAVSQIATFGTMAAKAAVRDVGRVLDLGYNFVDGVAKLIPFKPGKLVT
LEEAKKEEPLLAEREANEEEVKQLLELAQRVEGMTRNVGMHAGGVLIAPGKLTDFCPLYT
QGGEDAGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRMLDPSRADWNCSHIPL
TDKAAFDILKTANTVAVFQLESRGMQGMLKDAKPDRFEDIIALVALYRPGPMDLIPSFCA
RKHGREKVEYPDPRVEPVLKETYGIMVYQEQVMQMAQIVGGYSLGGADLLRRAMGKKKAE
EMAEHRALFRAGAAKDGLTTEKADEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHH
PAEFMAANMSLAMDDTDKVKILYDDAEGKNGLKVLPPDINASQYRFTPTDAKTLRYGLGG
VKGSGQGAIEDILRAREDGPFKDLFDFCERVDRRQVNRRTIEALVRAGAFDSLNDNRAQL
LVSIGLAMEAAEQKAAAANQVSLFDLMSGDDAEEHRPELLDEAPWTTKRKLQEEKQALGF
YLSGHLFDECRDEVRRFARTTLADLAREVNGNGNGNGNGGGYGSRDARNKTVAGVIVGLR
TQMTQRGKMIVVMLDDGSQSEATEVTVFNELFDANRALFKEDEVLIVQGNARHDTFTGGV
RMTAEAVMDLTQARSRYADALGLVFRDNASAARLRELLTPHLAAQTPGVRVHISYAANGA
RCEAVLGEQWQVTPSDDVLASFRSALSNENVYMIYG
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgccgcgctttgtccatctccgtctccattccgaatactccatcgtcgatggc
aacgtccgcctggacgaggccgtcaaggccgccgccgccgatggcatgggcgcactggcg
ctgaccgacctcgccaacgccttcggcctggtgcgcttctacaaggaagcgcgcggcaag
ggcgtcaagcccgtcgtcggcgccgatgtgtggatcaccaatcacgacgagcgcgacaag
cccggccgcctgctgctgctggtgcgcaacaagcagggctacctgaacctgtgcatgttg
ctggcgcgggcgtggctgtcgaaccagcatcgcggccgcgcggagatcgcccccgagtgg
ttcggcgagcccggcgtggaagacgcgccgctggccaccggcctgctggcgctgtccggc
gcgatgggcggcgacatcggcatggcgctcgccaacggcaacgaggcgctcgcgcgcaag
ctggcggcgcagtggtcgagcgtgttcccggaggcgttctacatcgagctgcagcgcgcc
gggcaggccggcaccgaggcctatgtgcagcgggccgtgaagctggccgcgtcgatgcac
ctgccggtggtcgccacgcacccggtgcagttcatgacgccggacgacttcaccgcccac
gaggcgcgcgtctgcatcgccgagggcgatctgctggccaacccgcgtcgcgccaggcgc
ttcaccaccgaccagtatttcaagacgcaggacgagatgtgcgcgctgtttgccgacatc
ccgtccgcgctggccaacgcggtgcagatcgcgcagcgctgcaacctgacgctggagctg
ggcaagcccaagctgccgctgttccccacgcccgacggcatgtcgctggacgactacctc
gcccacttggccaagcagggactggagcagcgcatggaagtgctgttccccgatcctgcg
gtgcgcgaagccaagcggcccgagtactacgcgcggctggagttcgagaccggcaccatc
atcaagatgggcttcccgggctacttcctgatcgtggcggacttcatcaactgggccaag
aacaacggcgtgccggtggggccgggccggggctcgggcgcgggctcgctggtggcatat
gcgctgggcatcaccgacctcgacccgctcaaatacaacctgctgttcgagcgcttcctg
aacccggaacgcgtgtcgatgcccgacttcgacatcgacttctgccagcacggccgcgac
cgcgtcatccattacgtgaaggagaagtacggcaaggacgccgtctcgcagatcgccacc
ttcggcaccatggccgccaaggccgcggtgcgcgacgtgggtcgcgtgctcgacctgggc
tacaactttgtcgatggcgtggccaagctgatcccgttcaagccgggcaagctcgtcacg
ctggaagaggccaagaaggaagagccgctgctggccgagcgcgaggccaatgaggaagaa
gtcaaacagctgctcgaactcgcccagcgcgtcgaaggcatgacccgcaacgtcggcatg
cacgcgggcggggtgctgatcgcgccgggcaagctgaccgatttctgcccgctttacacg
cagggcggggaagatgccggcgtcgtcagccagtatgacaaggacgacgtggaagccgtc
ggcctggtgaagttcgacttcttgggcctgaccacactcaccattctcgattgggccgag
cgctacatccgcatgctcgatccgtccagggcggactggaactgcagccacattccgctg
accgacaaggcggcgttcgacatcctcaagacggccaacacggtcgccgtgttccagctg
gaaagccgcggcatgcagggcatgctcaaggacgccaagcccgaccgtttcgaggacatc
atcgccctggtggcgctgtaccgcccgggcccgatggacctgatccccagcttctgcgcg
cgcaagcacggccgcgagaaggtggagtatcccgacccgcgcgtcgagccggtgctcaag
gagacctacggcatcatggtctaccaggagcaggtgatgcagatggcgcagatcgtcggc
ggctactcgctcggcggcgctgacctgttgcgccgcgcgatgggtaagaagaaggcggag
gagatggcggagcatcgcgcgctgttccgcgccggtgccgccaaggacggcctgaccacc
gagaaggccgacgagatcttcgacctgatggagaagttcgcgggctacggcttcaacaag
tcgcacgcggcggcgtatgcgctgctggcgtactacaccgcgtggctcaaggcgcaccac
ccggccgaattcatggcagccaacatgtcgctcgccatggacgacaccgacaaggtcaag
atcctctacgacgatgcggagggaaagaacggcctcaaggtgctgccgccggacatcaac
gccagccagtaccgcttcacgcccaccgacgccaagaccctccgctacgggctgggcggc
gtgaagggcagtgggcagggcgccatcgaagacatcctgcgcgcgcgcgaagacggtccg
ttcaaggacctgttcgacttctgcgagcgcgtcgatcgccgccaggtcaaccgccgcacc
atcgaagcgctggtgcgggccggtgccttcgacagcctcaacgacaatcgcgcgcagctg
ctggtctcgatcggcctggcgatggaggcggcggaacagaaggcggcggcggccaaccaa
gtgtcgctgttcgacctgatgagcggcgacgatgccgaggagcatcgccccgagctgctc
gacgaggcaccctggaccaccaagcgcaagctgcaggaagagaagcaggcgctgggcttc
tacctgtcgggccacctcttcgacgaatgccgcgacgaggtccgccgctttgcccggacg
acgctcgccgacctcgcccgcgaggtcaacggtaatggcaatggcaatggcaacggcggc
ggctacggtagccgtgatgcgcgcaacaagaccgtggccggcgtgatcgtcggcctgcgc
acgcagatgacccagcgcggcaagatgatcgtcgtcatgctcgatgatggctcgcagagc
gaggccaccgaggtgacggtcttcaacgagctgttcgatgccaaccgcgcgttgttcaag
gaagacgaagtgctgatcgtgcagggcaatgcgcggcatgacaccttcaccggcggggtg
cggatgacggccgaggcggtgatggacctgacccaggcgcgctcgcgctacgccgacgcg
ctcgggctggtgttccgcgacaacgcgtccgccgcgcggctgcgtgaactgctgacgccg
cacctggcggcccagacgcccggcgtgcgcgtgcacatcagctatgccgccaacggcgca
cgctgcgaagccgtgctcggcgagcaatggcaggtgacgccatcggacgatgtgctggcc
agcttccgctcggcgctgtcgaatgagaacgtctacatgatctacggctga
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integrated database retrieval system
