Ralstonia syzygii subsp. celebesensis: JK151_13805
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Entry
JK151_13805 CDS
T07219
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rsg
Ralstonia syzygii subsp. celebesensis
Pathway
rsg03420
Nucleotide excision repair
rsg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JK151_13805
03430 Mismatch repair
JK151_13805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsg03400
]
JK151_13805
Enzymes [BR:
rsg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JK151_13805
DNA repair and recombination proteins [BR:
rsg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JK151_13805
MMR (mismatch excision repair)
Other MMR factors
JK151_13805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QQV57078
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All DBs
Position
2977328..2979460
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AA seq
710 aa
AA seq
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MPAAIPTPETTLTPDYLAQLNDQQRQAVEFGISGADAAETGPLLVLAGAGSGKTHTLGWR
VAHLVANGADPQRILLLTFSRRAASELSSRAGHLLARAMHGSTGARSAAGTTYQTALPWA
GTFHGIGARLLREYAERIGLAPDFTIHDRSDSADLLNVVRHELNLSTKERRFPLKQTCLA
IYSRAINAEHPLDAVLKQHFPWCAMWQAQLRTLFDAYVEAKQAQHVLDYDDLLLYWHAMV
SDAGLAAEIGARFDHILVDEYQDTNRLQASILRALRPDGRGLTVVGDDAQSIYAFRAATV
RNILDFPRHFTRPARTVLLERNYRSTQPILDASNGVMRFATERFAKTLWTDRASTHRPRL
ISVRDEAEQARCVAEQVLQHREGGLALKSQAVLFRTASHSAPLEIELTRRNIPFVKYGGL
KFLEAAHVKDVLSVLRWAANPRNRIAGFRVIQLLPGAGPATAARVLDAMAEAAAPVAALL
AHEPPARLAGDWAALMTLMATLRAPKDGAAWAGELEAVGAWYAPHMERLHDDAAVRQGDL
DQLAHMAGTYASRERFLTEMTLDPPELTSDESGDPYRDEDYLILSTIHSSKGQEWKAVYL
LNAVDGCMPADLGAGSHDELEEERRLLYVAMTRARDHLDILVPQRFYVTQQTPNGDRHLY
ASRTRFIPPALLPLFEACAWPPPEPGADPAAEARAAAKVDLARKMRGYWR
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgccgccatccctaccccggaaaccaccctcacgcccgactacctggcgcaactg
aacgaccagcagcgccaggccgtcgagttcggcatttccggggcggacgccgcggaaacc
ggcccgctgctggtgctggcgggcgcgggctccggcaagacgcatacgctgggctggcgt
gtggcgcacctggtggccaatggggccgatccgcagcgcatcctgctgctgacattctcg
cgccgggcggcgagcgagctgtccagccgcgccggccacctgctggcgcgcgccatgcac
ggcagcaccggcgcgcggtcggccgccggcaccacgtaccagaccgcgctgccctgggcc
ggcaccttccatggcatcggcgcacgcctgctgcgcgaatacgccgagcgcatcggcctc
gcgcccgatttcaccatccacgaccgcagcgactcggccgacctgctcaacgtcgtgcgg
catgagctgaacctgtcgaccaaggaacgccgcttcccgctcaagcagacctgcctggcg
atctattcgcgcgccatcaacgccgagcacccgctggatgccgtgctcaagcagcacttc
ccgtggtgcgcgatgtggcaggcgcagctgcgcacgctgttcgacgcctatgtggaggcc
aagcaggcccagcacgtcctcgactacgacgacctgctgctgtactggcacgcgatggtg
tccgacgccggcctggccgccgagatcggcgcgcgcttcgaccacatcctcgtcgacgaa
taccaggacacgaaccggctgcaggcatcgatcctgcgcgcgctgcgcccggacgggcgc
ggcttgacggtggtcggcgacgatgcgcagtccatctacgccttccgcgcggcaacggtg
cgcaacatcctcgacttcccgcgccacttcacgcggccggcgcgcacggtgctgctggag
cgcaactaccgctccacgcagccgatcctggacgcgtccaacggcgtgatgcgctttgcc
accgagcgctttgccaagacgctgtggaccgaccgcgcatcgacccaccgcccgcgcctg
atctcggtgcgcgacgaggccgagcaggcgcgctgcgtggccgagcaggtgctgcagcat
cgcgagggcgggctggcgctgaagtcgcaggccgtgctgttccggaccgccagccacagc
gcaccgctggagatcgagctgacccgccgcaacatccccttcgtgaaatacggcgggctc
aaattcctggaagccgcgcacgtcaaggatgtgctgtcggtgctgcgctgggccgcaaac
ccgcgcaaccgcatcgccggcttccgcgtcatccagctgctgccgggcgccggccccgcc
accgccgcgcgcgtgctcgatgccatggccgaggcggccgccccggtcgccgcgctgctg
gcccatgagccgcctgcccgcctggccggcgactgggcggcgctgatgaccctgatggcc
acgctgcgtgcgccgaaggacggcgcggcatgggccggcgaactggaggcggtcggcgcc
tggtatgcaccccacatggagcgcctgcacgacgatgcggccgtccgccagggcgatctc
gaccagctcgcccacatggccggcacctacgcctcgcgcgagcgcttcctgaccgagatg
acgctcgatccgcccgagctgaccagcgatgaatccggcgatccgtaccgtgacgaggat
tacctgatcctgtcgaccatccactcctccaaggggcaggagtggaaggccgtctacctg
ttgaacgccgtggacggctgcatgcccgccgacctgggcgccggctcgcacgacgagctg
gaagaggaacgccggctgctctacgtggccatgacgcgcgcccgcgaccatctcgacatc
ctggtgccgcagcgcttctacgtcacccagcagacgcccaacggcgaccgccacctctac
gcgtcgcgcacgcgcttcattccgccggcgctgctgccgctgttcgaggcctgcgcctgg
ccgccgcccgaacccggcgccgacccggctgccgaggcacgcgcggcggccaaggtggac
ctggccaggaagatgcgcggctactggcggtag
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