Ralstonia syzygii subsp. celebesensis: JK151_22500
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Entry
JK151_22500 CDS
T07219
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
rsg
Ralstonia syzygii subsp. celebesensis
Pathway
rsg02020
Two-component system
rsg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rsg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JK151_22500
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JK151_22500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsg03021
]
JK151_22500
Transcription machinery [BR:
rsg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JK151_22500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF7344
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QQV58128
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All DBs
Position
pRscUGMSS_Db01:1349570..1351072
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AA seq
500 aa
AA seq
DB search
MVKAALEMRAKQHLALTPRLQQSVKLLQLSATEFAQEMQEALTSNPFLEEVEDNTGTPPE
AARAGEAMPGSEADSAAADRTPPDDAPLETTTSAIETDPAIDASDEFPTDFGSYTSYGSA
HHGDGEDNDIGEWVHATPSLREHLHQELRSYRLSERDSLLAQTVIEALDDDGYLRQTLSE
LMPLAPVEPAPAEKEMQIALALVQSLDPPGVAARDLAECLRLQIEARPADTEAEERVQEI
ALDIVRSHLPRLAKRDLTHIRRAVGCEEDELREACALIRTLDPRPGLRFSQAHAGYIVPD
VIVAKIKGKWVAVTNPAVAPCARINKVYAELFAQTRGHHRTPLAHQLQEARWLIRNAQQR
FATIQRVAEAIVAHQKHFLEYGEVAMRPLVLRDVAEELGLHESTISRATGNKFMATPRGI
FEFKYFFSRQLATDTGGACSAASVRALLKEMIEAEDAQAPLSDVSLAKMLAEQGVIVARR
TVAKYRGLMRIASAELRRQV
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaggccgctctcgaaatgcgtgcgaagcagcatctcgcgctcacgccccgattg
cagcagtccgtgaaactgctgcagctgtcggcaaccgaatttgcacaggaaatgcaggaa
gcgcttaccagcaacccattcctggaagaagtcgaagacaacacgggcacaccgccggaa
gcggcccgtgccggcgaggccatgccgggcagcgaagccgacagcgccgccgccgaccgc
acgccgccggatgatgcgccgctcgagaccaccaccagcgccatcgagaccgaccccgcc
atcgacgcatccgacgaatttcccaccgacttcggcagctacaccagctacggttcggcc
catcacggcgacggcgaggacaacgacatcggcgaatgggtgcacgccacgcccagcctg
cgcgagcacctgcaccaggagctgcgcagctaccgcctgtccgagcgcgacagcctgctc
gcccagacggtgatcgaagcactggacgacgacggctacctgcgccagacgctctccgaa
ctgatgccgctggcaccggtcgagcccgcgcccgccgagaaggaaatgcagatcgcgctg
gcgctggtgcagagcctggacccgccgggcgtagccgcgcgtgacctggccgaatgcctg
cgcctgcagatcgaggcgcgtccggccgacacggaggccgaggagcgtgtgcaggagatc
gcgctggacatcgtgcgcagccatctgccgcgcctggccaagcgcgacctgacccacatc
cgccgcgcggtcggctgcgaggaggacgagctgcgcgaagcctgcgcgctgatccgcacg
ctggacccgcgcccggggctgcgcttctcgcaggcgcatgcgggctacatcgtgcctgac
gtgatcgtcgccaagatcaagggcaagtgggtggccgtgaccaacccggcggtggcgccg
tgcgcgcgcatcaacaaggtctacgccgaactcttcgcgcagacgcgcggtcatcaccgc
acgccgctcgcgcaccagctgcaggaagcgcgctggctgatccgcaacgcgcagcagcgc
ttcgccaccatccagcgcgtggccgaggccatcgttgcgcaccagaagcacttcctcgaa
tacggcgaggtcgcgatgaggccgctggtgctgcgcgacgtggccgaagagctcggcctg
catgaatcgaccatctcgcgcgccaccggcaacaagttcatggcgacgccgcgcggcatc
ttcgagttcaagtacttcttctcgcgccagctcgccaccgacacgggcggtgcctgttcg
gcggcttccgtgcgcgccctgctcaaggagatgatcgaggccgaagacgcacaggcaccg
ctgtccgatgtgtcgctggccaagatgctggccgagcagggcgtgatcgtcgcgcgccgc
acggtggccaagtatcgcggcctgatgcgcatcgcgtccgccgagctcaggcggcaggtc
tga
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