Cereibacter sphaeroides ATCC 17029: Rsph17029_0178
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Entry
Rsph17029_0178 CDS
T00484
Name
(GenBank) UvrD-like DNA helicase, C terminal
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
rsh
Cereibacter sphaeroides ATCC 17029
Brite
KEGG Orthology (KO) [BR:
rsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsh03400
]
Rsph17029_0178
Enzymes [BR:
rsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Rsph17029_0178
DNA repair and recombination proteins [BR:
rsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Rsph17029_0178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_30
DUF3638
Motif
Other DBs
NCBI-ProteinID:
ABN75297
LinkDB
All DBs
Position
1:194649..197969
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AA seq
1106 aa
AA seq
DB search
MSGQRDEASERQVQAADPRASTWLSANAGSGKTRVLTDRVARLLLDGVEPQRILCLTYTK
AAASEMQNRLFRRLGEWAMLDDAELRHALDTLGVAAVGHEVLAQARRLFARAIETPGGLR
IQTIHSFCATLLRRFPLEAGVSPQFTELDDRAARLLREEIVEELADRIAPGVVADLARAY
TGEDFGALAEEVARNAAGLLPPLDAPACRALYGVEGDEAALLAQVFLGGEAEWMPALIAA
LEAGSANDQKAAAKLRLLSFASPTTATLAGLEGVLLTGASAKEPYTAKLGSFPTKATRGA
LGPLADRLDALMRRVEAARPVRCCLLAAERARLIHAFAGVFLPLYQARKAARGWLDFDDL
IQRAKGLLTDPSVAQWVLFRLDGGIDHILVDEAQDTSPDQWKVIELLAQEFTSGRGAREV
ERTIFVVGDKKQSIYSFQGADVAAFDRMRAEFGERLAGARRRLEELDLLHSFRSSPAILR
LVDLTFDEPRRQALGGEVRHIAFRGDMPGRAELWPLVEAAEEPEPENWFDPVDLVSDEHH
AARLARQVATRIRAMIEAGVQIPQPGGFRPVAAGDFLILVQRRSDIFGEIIRACKEARLP
IAGADRLKLGAELAVRDLSALLAFLATPEDDLSLAAVLRSPLFGWSEGELFDLAHGREGY
LWRRLYDREAAHPATVAILRDLRDQADFLRPFDLIERALTRHDRRRRLLARLGEEAEDGI
DELLSQALAYERTDVPSLTGFLTWLQTDEVEVKRQMEAAGGRIRVMTVHGSKGLEAPIVI
LPDTADRKPRERDELFTLEGGARVWKTPAAESPPQIAAAREARRARDAAENLRLLYVAMT
RAQCWLIAAAAGKLETGGAWHDLIRQGMEAAGAERRDDGALVLDEGLWPPAAPQASAAAA
AARPVLPAWALAPAAEPPAAPEVLSPSALGGAKALPGDAMPTEEALAHGSAVHRLLEHLP
LHPPEGWEAAARGLLPDLPDVAPVLAEARAVLSAEHLAEALVPHALLEVAVTAKVAGRRL
SGTIDRLVVEPDRVLAVDYKTNRVVPDRPEEVPEGILRQMGAYAEALAQIYPGRTIETAI
LWTQAARLMRLPRDIVRSAMVRATTT
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccagagggacgaggcctccgaacgtcaggtgcaggccgccgatccgcgcgcc
tcgacctggctttccgccaatgcgggctcgggcaagacgcgggtgctgaccgaccgggtg
gcgcggctgctgctcgacggggtcgagccgcagcgcatcctctgcctgacctataccaag
gccgccgcctccgagatgcagaaccggctgttccggcggctgggcgaatgggcgatgctc
gacgatgccgagttgcgtcacgcgctcgatacgctgggcgtggccgccgtggggcacgag
gtgctggcgcaggcccgcaggctattcgcccgcgccatcgagacgccgggcgggctgcgg
atccagacgatccactccttctgcgcgacgctcctgcgccgctttccgctggaggccggg
gtctcgccgcagttcaccgagctcgacgaccgcgccgcacgcctcctgcgcgaggagatc
gtcgaggagttggccgaccggatcgcccccggcgtggtggccgatctggcacgcgcctat
acgggggaggatttcggcgcgctggccgaggaggtggcgcgcaatgccgcgggcctcctg
ccgccgctcgacgccccggcctgccgggcgctctacggggtggagggcgacgaggcggcg
cttctggcgcaggtcttcctcggcggcgaggcggagtggatgcccgcgctgatcgcagcc
ctcgaggcgggatcggcgaacgaccagaaggctgcggcgaagctgcggcttctgtccttc
gcgtcgccgacgaccgccacattggccgggctcgagggggtgctcctgaccggggcctcg
gccaaggagccctataccgccaagctcggcagcttcccgaccaaggccacgcgcggggcg
ctgggcccgctcgctgaccggctcgatgcgctgatgcgccgggtcgaggccgcgcgcccc
gttcgctgctgcctgctcgccgccgagcgggcgcggctgatccatgccttcgcgggcgtg
ttcctgccgctctatcaggcgcgcaaggccgcccgcggctggctcgatttcgacgatctg
attcagcgcgccaagggcctgctgaccgatccgtcggtggcgcaatgggtgctcttccgg
ctcgacggcgggatcgaccatatcctcgtcgacgaagcgcaggacacgagccccgaccag
tggaaggtgatcgagctgctggcgcaggaattcacctcggggcgcggcgcgcgcgaggtg
gagcggacgatctttgtcgtgggagacaagaaacagtcgatctactcgttccagggcgcc
gatgtggcggccttcgatcggatgcgggccgagttcggagagcgtctcgcgggcgcccgg
cggcggctcgaggagctggatctgctgcattccttccgctcctcgcccgcgatcctgcgg
ctggtggatctcaccttcgacgagccccgccggcaggcgctgggcggcgaggtccgccac
atcgccttccgcggcgacatgccggggcgggccgagctctggccgctggtcgaggccgcc
gaggagcccgagcccgagaactggttcgatccggtggacctcgtctcggacgagcatcat
gcggcgcggctcgcacggcaggtggccacccgcatccgcgccatgatcgaggcgggggtg
cagatcccgcagcccggcggcttccgccccgtcgcggcgggcgatttcctgatcctcgtc
cagcgccgctcggacatcttcggcgagatcatccgggcttgcaaggaagcccgcctgccc
atcgccggggccgaccggctgaagctcggggccgagcttgcggtgcgcgacctgtcggcg
ctgctcgccttcctcgccacgcccgaggacgatctgtcgctcgccgccgtcctgcgctcg
ccgctcttcggctggagcgagggcgagctcttcgatctggcgcacgggcgggagggctat
ctctggcgccggctctacgaccgcgaggcggcccatcccgcgacggtggcgatcctgcgg
gacctgcgcgatcaggcggatttcctgcgccccttcgacctgatcgagcgcgcgctgacc
cgccacgaccgccgccgccggctgctggcccggctgggcgaggaggccgaggacgggatc
gacgaactgctcagtcaggcgctggcctacgagcggaccgacgtgccgagcctcaccggc
ttcctgacatggcttcagaccgacgaagtcgaggtaaagcggcagatggaggccgcgggc
gggcgcatccgggtgatgacggtgcatggctcgaaagggctcgaggcgcccatcgtgatc
ctgcccgacacggccgaccgcaagccgcgcgagcgcgacgagctgttcacgctggagggg
ggcgcgcgggtctggaagacgcccgccgccgagagcccgccgcagattgccgccgcccgc
gaggcgcggcgcgcgcgcgatgcggccgagaacctgcggctgctctatgtcgccatgacg
cgggcccagtgctggctgatcgcggcggcggccggcaagctcgagacggggggcgcctgg
cacgacctgatccggcaggggatggaggccgcgggcgccgagcggcgtgacgacggggcg
ctggtgctcgacgaaggcctctggcccccggccgcgccgcaggcctcggcagcggccgcc
gccgcgcggcccgtcctgcccgcctgggcgctggcgcctgcggccgagcccccggccgcg
cccgaggtgctgtcgccctcggccctcggcggggccaaggcgctgcccggcgacgcgatg
cccaccgaggaggcgctggcgcatggctcggccgtccaccggctgctcgagcatctgccg
ctccatccgcccgaggggtgggaggcggcggcgcgggggctcctgcccgatcttcccgat
gtggcccccgttctcgcggaggcccgggcggtgctctcggccgaacatctggccgaggcg
ctggtgccgcatgcgctgctcgaggtggcggtgacggccaaggtggcggggcggcggctt
tccggcaccatcgaccggctggtggtggagcccgaccgggtgctggcggtcgattacaag
acgaaccgtgtggtcccggaccgtcccgaagaggtgcccgagggcatcctgcggcagatg
ggcgcctatgccgaggcgctggcgcagatctaccccggacggacgatcgagacggcgatc
ctctggacgcaggcggcccgcctgatgcggctgccccgcgatatcgtgaggtcggccatg
gtccgggccacgacaacttga
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