KEGG   Cereibacter sphaeroides ATCC 17029: Rsph17029_0317
Entry
Rsph17029_0317    CDS       T00484                                 
Name
(GenBank) Uncharacterised P-loop ATPase protein UPF0042
  KO
K06958  RNase adapter protein RapZ
Organism
rsh  Cereibacter sphaeroides ATCC 17029
Brite
KEGG Orthology (KO) [BR:rsh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsh03019]
    Rsph17029_0317
Messenger RNA biogenesis [BR:rsh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     Rsph17029_0317
SSDB
Motif
Pfam: RapZ-like_N PapZ_C AAA_28 AAA_22 Rad17 AAA_18 AAA_16 AAA_29 AAA_27 AAA_30 T2SSE IIGP AAA_23 nSTAND3
Other DBs
NCBI-ProteinID: ABN75433
UniProt: A3PGG7
LinkDB
Position
1:334317..335225
AA seq 302 aa
MVEPVQEYRLVLVTGPSGAGRTTAINALEDMGYEVIDNLPLSFVPRLIEGPSIGRPIALG
LDVRNRDFNATALIELIDRLTQDPRVALEVLYVDCSASELIRRYNQTRRRHPLAPAETPA
EGVEREIDLLAPVRVRADHLIDTSEMSPHDLKAELSRWFDRGAATRLAVSVQSFSYKRGV
PRGVDMIFDCRFLKNPYWVESLRTLDGREASVADYISSDPRFGPFFEKLRDLVLFLLPAQ
LEEGKAHLSLGFGCTGGQHRSVAVAELLGNALAEAGWPVSKRHRELERRAAAVLPTHQGE
KA
NT seq 909 nt   +upstreamnt  +downstreamnt
atggtagagcctgtgcaggaataccggctcgtgctggtcaccggcccttcgggggcgggg
cgcacgaccgcgatcaatgcgctcgaagacatgggctatgaggtcatcgacaacctgccc
ctgtccttcgtgccccggctgatcgagggaccctcgatcgggcggccgattgcgctgggg
ctcgatgtgcgcaaccgcgacttcaatgccacggcgctgatcgagctgatcgaccggctg
acgcaggatccgcgcgtggcgctcgaggtgctctatgtggactgttcggcctccgaactg
atccgccgctacaaccagacccggcgccgccatccgctggccccggccgagacgcccgcc
gaaggggtcgagcgcgagatcgacctgctcgcccccgtgcgcgtccgggcggaccatctg
atcgacacgtccgaaatgtcgccgcacgatctcaaggccgagctctcgcgctggttcgac
cgcggtgcggcaacccgtcttgcggtgtcggtgcagtccttctcctacaagcggggcgtt
ccgcgtggggtggacatgatcttcgactgccgattcctgaagaacccctattgggtcgag
agcctgcggacgctcgacggccgcgaggcgtcggtggccgactacatttcctcggacccc
cgcttcggtcccttcttcgagaaactccgcgatctcgtgctgttcctgctgccggcgcag
ctcgaggagggcaaggcccatctgtccctcggcttcggctgcacgggcgggcaacaccgg
tcggtcgccgttgccgaacttctgggcaatgcgcttgcagaagcgggctggccggtgtca
aaacgacacagggaacttgaacgcagggcggccgctgtgctccccacgcatcagggtgag
aaggcgtga

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