Cereibacter sphaeroides ATCC 17029: Rsph17029_0766
Help
Entry
Rsph17029_0766 CDS
T00484
Name
(GenBank) ATP-dependent DNA helicase, Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rsh
Cereibacter sphaeroides ATCC 17029
Pathway
rsh03420
Nucleotide excision repair
rsh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Rsph17029_0766
03430 Mismatch repair
Rsph17029_0766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsh03400
]
Rsph17029_0766
Enzymes [BR:
rsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Rsph17029_0766
DNA repair and recombination proteins [BR:
rsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rsph17029_0766
MMR (mismatch excision repair)
Other MMR factors
Rsph17029_0766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABN75877
LinkDB
All DBs
Position
1:771514..773874
Genome browser
AA seq
786 aa
AA seq
DB search
MAGMSQFDESEAFEAAVPLSQRAMAARPRPYIDELNPAQRAAVLALDGPVLMLAGAGTGK
TKALTARIVHLLDSGKARPNEILAVTFTNKAAREMKDRVARLLGQVEGMPWMGTFHAISV
KILRRHAELVGLKSNFTILDTDDQLRLLKQLIVAANIDEKRWPARMLAGLIDHWKNRAWT
PAKVPASEASAYNNRGTELYDQYQQRLRELNATDFGDLLLHVLTIFQSHPDVLEQYRRWL
RYILVDEYQDTNVAQYMWLRLLAQTHRNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGA
QVIRLEQNYRSTPHILAAASGIIAANAGRLGKTLWTERQEGEKVRLIGHWDGEEEARWIG
DEVESFQRGRGGLGPFRLDDMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERLEIR
DAMAYFRLAVSPDDDLAFERVVNQPKRGLGDKAQQEIQREARAHGTSLLEGARSLLARGG
IGGKGAGQLRAFVDGMDRWHGTTLDRDHDHIRLAEQILDESGYTAMWQADKTPEAPGRLE
NLKELVKALEQFENLQGFLEHVALIMENETEESVDKVTIMTLHAAKGLEFPVVFLPGWED
GLFPSQRAMDETGLKGLEEERRLAYVGITRAEQLCTISFAANRRVYGQWQSQLPSRFIDE
LPSAHVEVLTPPGLYGGGYGAAGMASSLEAQALRADVYDSPGWKRMQTRAGGRPMAQPRE
SRHVTIDLEAVSAFAEGDRVFHQKFGYGHVMGIEGDKLDIDFEKAGAKKVVARFVVAAHQ
ADDIPF
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
ttggcgggcatgagccagttcgatgaaagcgaagccttcgaggcggccgtgccgctcagc
cagcgcgccatggccgcgcgcccacgcccctatatcgacgagctgaatccagcgcagcgt
gcggcggttctggcgctggacgggccggtgctgatgctggccggagcgggcaccggcaag
acgaaggcgctgacggcgcgaatcgtgcatctgctcgattcgggaaaggcgcggccgaac
gagatcctcgccgtgaccttcaccaacaaggccgcgcgcgagatgaaggatcgggtggcc
cgcctcctggggcaggtcgagggcatgccctggatgggcaccttccacgccatcagcgtc
aagatcctgcgccggcatgccgaactggtggggctgaagtcgaacttcaccatcctcgac
acagacgaccagctccggctgctgaagcagctgatcgtcgcggccaacatcgacgagaag
cgctggcccgcccggatgctggccggcctcatcgaccactggaagaaccgcgcctggacg
ccggcgaaggtgcccgcctcggaggcgtcggcctacaacaaccgcggcaccgaactctac
gaccaatatcagcagcgcctgcgcgagctgaatgccaccgatttcggcgatctgctgctc
catgtgctgacgatcttccagtcgcaccccgacgtgctcgagcaatatcgccgctggctg
cgctacatcctcgtggacgaatatcaggacacgaacgtcgcgcaatatatgtggctcagg
cttctggcgcagacgcaccgcaacatctgctgcgtgggcgacgacgaccagtcgatctac
ggctggcgcggggccgaggtgggcaacatcctgcggttcgagaaggattttcccggcgcg
caggtgatccggctcgaacagaactaccgctcgaccccgcatatcctcgccgccgcctcg
ggcatcatcgcggccaatgcgggccggctcggcaagacgctctggaccgagcggcaggag
ggcgagaaggtccggctgatcggccactgggacggcgaggaagaggcccgctggatcggc
gacgaggtcgagagcttccagcgcggccgcggcggcctcggccccttccgtctcgatgac
atggcgatcctcgtgcgcgccagccaccagatgcgcgccttcgaggaccgtttccttacc
atcgggctgccctaccgcgtcatcggcggcccgcgcttctacgagcggctcgagatccgg
gatgcgatggcctatttccgcctcgccgtcagcccggacgacgatctggccttcgagcgg
gtggtgaaccagccgaagcgcggactgggcgacaaggcccagcaggagatccagcgcgag
gcccgcgcccatggcacctcgcttctcgaaggcgcgcgcagccttctggcccgcggcggc
atcggcgggaagggggcggggcagctccgcgccttcgtcgacggcatggaccgctggcac
ggcaccacgctcgaccgcgaccatgaccatatccgcctcgccgagcagatcctcgacgag
tcgggctacaccgccatgtggcaggccgacaagacgcccgaggcgccgggccggctcgag
aacctcaaggagctggtgaaggcgctcgagcagttcgagaacctgcagggattcctcgag
cacgtcgccctcatcatggagaacgagaccgaggaatcggtcgacaaggtcacgatcatg
acgctccacgcggccaaggggctggagtttcccgtcgtcttcctgccgggctgggaggac
gggctgttcccgtcacagcgcgcgatggacgagaccggcctcaaggggctcgaggaggag
cggcggctggcctatgtcggcatcacccgtgccgagcagctctgcaccatctccttcgcg
gccaaccgccgggtctatggccagtggcagagccagctgccgtcgcgcttcatcgacgag
ctgccgtccgcccatgtcgaagtgctcaccccgccgggcctctatggcggcggctacggc
gcggccggcatggcctcctcgctggaagcgcaggccctgcgggccgatgtctacgattcg
cccggctggaagcggatgcagacccgtgccggcggccgcccgatggcccagccgcgcgaa
tcgcgccatgtcaccatcgacctcgaagccgtctcggccttcgccgagggcgaccgcgtc
ttccaccagaagttcggctatggccatgtcatggggatcgagggcgacaagctcgacatc
gatttcgagaaggcaggagcgaagaaggtcgtggcccgcttcgtggtggcggcgcatcag
gccgacgacatccccttctag
DBGET
integrated database retrieval system
