Cereibacter sphaeroides ATCC 17029: Rsph17029_0908
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Entry
Rsph17029_0908 CDS
T00484
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rsh
Cereibacter sphaeroides ATCC 17029
Pathway
rsh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rsph17029_0908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsh03400
]
Rsph17029_0908
Enzymes [BR:
rsh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Rsph17029_0908
DNA repair and recombination proteins [BR:
rsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Rsph17029_0908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
ABN76019
UniProt:
A3PI53
LinkDB
All DBs
Position
1:complement(933127..934584)
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AA seq
485 aa
AA seq
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MPEVVLPRLGTVAAWRAEARRLAQAGVPAESVVWRVGAGEADLFADLPALPAGPARQIRL
SREAVGSLETALCHADPERFGRAYGLLLRLADGTLRWGDRSDPALRKLLAQEKMVRREIH
KMHAFVRFRELPSEGSRRAFAAWFEPDHPVEEAATPFFARRFGDMDWAIVTPEVTARFVA
GQLDFAPTEERAAPPADGTEELWRTYYANIFNPARLMVKAMQSEMPKRYWKNLPEAELIP
GLIRGAAERAAEMQAAAPTEPPARTAAVARQRAAAAGGPPAASDGSAPGSLAEAKTAAEG
CRRCGLWANATQVVFGEGPATARMMVVGEQPGDREDLAGRPFVGPAGQLFDEEAAAAGLD
RGSVYVTNAVKHFKFTPRGKRRIHQKPDAGEVTACRWWLDLERDLVRPRLIVAMGATALA
SLTGSGAGILKRRGSLERLDDGTPLFVTVHPSYILRLPDEAARAEERRRFRADLEEARQL
LERLD
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaggtggtcctgccgcgtctgggaaccgtggcggcctggcgcgccgaggcccgg
cggctggcgcaggcgggtgttccggcggaaagcgtcgtctggcgcgtgggcgcgggcgaa
gccgacctttttgccgacctgcccgccctgcccgcgggcccggcgcgccagatccggctg
tcgcgcgaggcggtcggctcattggagactgccctctgccacgccgatcccgagcggttc
gggcgtgcctacggtcttctcctgcggctggcggacggcactttgcgctggggcgaccgg
agcgatcccgcgctgcgcaagctccttgcgcaggagaagatggtccggcgcgagatccac
aagatgcacgccttcgtccgcttccgcgagcttccctcggaaggctcccgccgggccttc
gcggcctggttcgagccggaccatccggtcgaggaggcggcgacgcccttcttcgcccgc
cggttcggcgacatggactgggccatcgtcacgcccgaggtcaccgcgcggttcgtggcg
gggcagctcgatttcgccccgaccgaggagcgcgccgcgccgccggccgatggaacggaa
gagctgtggcggacctactacgccaacatcttcaatccggcgcggctgatggtgaaggcg
atgcagtccgaaatgccgaaacgctactggaagaacctgcccgaggcggagctgattccg
ggcctgatccggggtgcggccgaacgggcggccgagatgcaggccgcagcgccgaccgag
ccgcccgcgcgaacggcggccgtggcgcggcagcgcgcggcggcggcgggcggcccccct
gcggccagcgacggttcagcgcccggctccttggctgaagcgaagaccgcagccgaggga
tgccggcgctgcggcctctgggccaatgccacgcaggtcgtgttcggggagggaccggcc
acggctcgcatgatggtcgtgggcgagcagcccggggatcgcgaggatctggccggacgg
cccttcgtgggccccgcggggcaactcttcgacgaggaggcggcagcggccggcctcgat
cgagggtcggtctatgtcaccaacgcggtcaagcacttcaagttcaccccgcgcggcaag
cgccgcatccaccagaagcccgacgcgggcgaggtgactgcctgccgctggtggctcgat
ctcgagcgggatctggtgcgcccccgcctgatcgtcgcgatgggcgcaacggcgctcgcc
tcgctcaccggctccggagcggggatcctcaagcggcgcgggtcgctcgagaggctcgac
gacgggacgcccctgttcgtgacggtccatccctcctacatcctgcgcctgccggacgag
gccgcgcgcgccgaggaacgcaggcggtttcgtgcagatcttgaggaggcccgacagctg
ctggagcgtctggactga
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