Cereibacter sphaeroides ATCC 17029: Rsph17029_0940
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Entry
Rsph17029_0940 CDS
T00484
Name
(GenBank) RNA-binding S4 domain protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
rsh
Cereibacter sphaeroides ATCC 17029
Brite
KEGG Orthology (KO) [BR:
rsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsh03009
]
Rsph17029_0940
Enzymes [BR:
rsh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Rsph17029_0940
Ribosome biogenesis [BR:
rsh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Rsph17029_0940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
ABN76051
LinkDB
All DBs
Position
1:complement(967378..968847)
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AA seq
489 aa
AA seq
DB search
MTDSKDGERIAKVLSRAGIASRRDAERMIELGRIAVNGRTIDSPALNVGPKDRITVDGQP
LAPPEPARLWLYYKPEGLVTSASDEKGRETVFDHLPEGMPRVMSVGRLDLNSEGLLLLTN
DGELKRRLELPSTGWLRKYRVRVKGNPTDADLEPLRKGITVEGESFQPMTVSLDRVQGAN
AWLTVGLREGKNREIRRAMSALGLTVNRLIRVSYGPFRLNELEPGMVEEVRPKILRDQLG
LDPHADGEARPARGRKPEGAARAEGAARSERTARPPRGAAAEGPTRPARAAGSEGSAGAT
RGRSPQGAAPKAGAPKDGARFAGKGPAEGARPARSAATDPARASRPASTETTGRTRTAEG
RGKPAAAGRSGKTEAADAPRAFRSRSAEAPAKGPRGPAKAAGPARSRREALPDTPIDARA
PRGRAAAGPKAKGGSPAKAAPTPRAKGAGETAGGRGPRTGGPSAQGDRKPQPTGPRPPSR
GPKGRPGGR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacagcaaagacggcgagcgcatcgccaaggttctctctcgtgcgggcatcgcc
tcgcgccgcgacgccgagcggatgatcgagcttggccgcatcgcggtgaacgggcgcacc
atcgacagcccggcgctgaatgtgggcccgaaggaccgcatcaccgtcgacggccagccc
ctggcgccgcccgagcccgcccgcctgtggctctattacaagcccgagggactcgtcacc
tcggcctcggacgagaagggccgcgagacggtcttcgaccacctgcccgaggggatgccc
cgcgtcatgtcggtgggacggctcgatctcaattccgagggtctcctcctcctgaccaat
gacggcgaactgaagcgccggctcgagctgccctccaccggctggctgcgcaagtaccgc
gtgcgggtgaagggcaacccgaccgacgccgacctcgagccgctgcgcaaggggatcacg
gtcgagggcgagagcttccagccgatgaccgtctcgctcgaccgggtgcagggcgccaac
gcctggctcacggtgggcctccgcgagggcaagaaccgcgagatccgccgcgccatgtcc
gccctgggcctcaccgtgaaccggctgatccgcgtgagctacggtcccttccggctgaac
gagctcgagcccggcatggtcgaggaggtgcgccccaagatcctgcgcgaccagctcggc
ctcgatccgcatgccgacggcgaggcgcgcccggccaggggacggaagcccgaaggtgcc
gcacgagccgaaggcgccgcacgctccgaaagaaccgcgcgtccgccgcgcggggccgcg
gcggagggacccacccgcccggctcgggcagcggggtccgaaggctccgcaggcgccacc
agagggcgctcgccgcagggggctgcgcccaaggcaggggcgcccaaggacggggcacgc
ttcgcaggcaaaggcccggccgagggtgcgcgcccggcgcggagcgccgcaacggacccc
gcgcgcgcctcccgaccagcgagcaccgagaccaccggacgcacccgaacggcggagggc
cgaggcaaacccgccgccgcaggacggtccggcaagaccgaggcggccgacgcgccgcgt
gcgttccgcagccgcagcgccgaggcgcccgccaagggtccgcgcggtccggccaaggcc
gcgggtccggcccgcagccggcgagaagccctgcccgacacgccgatcgacgcccgtgcg
ccgcggggtcgcgccgcggcgggtccgaaggccaagggcggcagtccggccaaggccgcc
cccactccgcgcgccaagggagcgggcgagaccgccggcggacggggcccccggacgggc
gggccgtctgcccagggggaccggaaaccgcagcccacaggcccccgcccgccctcgcgc
ggaccgaaaggccggcccggcgggcgctga
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integrated database retrieval system
