Cereibacter sphaeroides ATCC 17029: Rsph17029_0954
Help
Entry
Rsph17029_0954 CDS
T00484
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rsh
Cereibacter sphaeroides ATCC 17029
Pathway
rsh00061
Fatty acid biosynthesis
rsh00071
Fatty acid degradation
rsh01100
Metabolic pathways
rsh01212
Fatty acid metabolism
rsh02024
Quorum sensing
rsh04146
Peroxisome
Module
rsh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rsh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rsph17029_0954
00071 Fatty acid degradation
Rsph17029_0954
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rsph17029_0954
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rsph17029_0954
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rsh01004
]
Rsph17029_0954
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsh04147
]
Rsph17029_0954
Enzymes [BR:
rsh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rsph17029_0954
Lipid biosynthesis proteins [BR:
rsh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rsph17029_0954
Exosome [BR:
rsh04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rsph17029_0954
Exosomal proteins of breast cancer cells
Rsph17029_0954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ABN76065
LinkDB
All DBs
Position
1:complement(981366..983327)
Genome browser
AA seq
653 aa
AA seq
DB search
MAETGDLVSIPALLHRNATAFPRQPAYREKEFGIWQVWNWAEAASEIRAIALGFLALGMQ
RGDHVAVVGRNRPALYWSMVAAQMCGAVPVPLYQDAVAEEMVYVLDHCGARFVICGDQEQ
VDKVIEVQDRIHHIEQVVYVDKRGMRKYDHSRMNWLEDVVAEGRAAHRRFDEELDRRIAE
LEYDSTCVMLYTSGTTGKPKGVVLSNRNIIETSKNSVAFDGLRPGDEVLAYLPMAWVGDF
IFSVGQAMWTGFCVNCPESATTMMNDLREIGPTYFFAPPRVFEGQLTNVMIRMEDAGRIK
KALFRHYMEVARRVGPAILDGRPVSTADRIAYWIGDKLIYGPLKNTLGFSRVRVGYTAGE
AIGPEIFDFYRSLGINLKQLYGQTEASVFITQQPDGQVRSDTVGVPSPGVEVRIAETGEV
FYRSPGTFVAYYKNPESTASTKDAEGWVATGDAGFFEEATGHLRIIDRAKDVGKMADGRL
FAPKYVENKLKFYPSILEAVVFGNGRERCTAFLNIDLAAVGNWAERNNIAYSSYQELAGH
PKVYEMMKGHVEEVNRSVAEDPMLSGCQIHRFLILHKELDADDGEMTRTRKVRRKVIEEK
YDDLIAALYDGRTSIHTETEVTYEDGRKGAIRATLRIEDAATHGASAQRMAAE
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaacgggggacctcgtctcgattccggcgctgctgcacaggaacgccaccgcg
ttcccgcgacagcccgcctatcgggagaaggaattcggcatctggcaggtctggaactgg
gcggaggcggcgtccgagatccgcgccatcgcgctgggcttcctcgcgctcggcatgcag
cggggcgaccatgtggcggtggtggggcgcaatcgcccggcgctctactggtcgatggtg
gcggcgcagatgtgcggcgcggtgcccgtgcccctctatcaggacgcggtcgccgaggag
atggtctatgtgctcgaccattgcggcgcgcgcttcgtcatctgcggcgatcaggagcag
gtcgacaaggtcatcgaggtgcaggaccggatccaccatatcgagcaggtggtctatgtc
gacaagcggggcatgcggaagtacgaccattcccgcatgaactggctcgaggatgtggtg
gccgagggccgcgccgcccatcgccgcttcgacgaagagctcgaccgccggatcgccgag
cttgaatacgattcgacctgcgtgatgctctatacctcagggacgaccggcaagcccaag
ggcgtggtcctgtcgaaccgcaacatcatcgagacctcgaagaattcggtcgcgttcgac
ggcctgcgccccggagacgaggtgctggcctatctgccgatggcctgggtcggcgatttc
atcttctcggtcggtcaggcgatgtggacgggcttctgcgtgaactgccccgagagcgcg
accaccatgatgaacgatctgcgcgagatcgggcccacctatttcttcgccccgccgcgc
gtcttcgagggccagctcaccaatgtgatgatccggatggaggatgcgggccggatcaag
aaggcgctcttccggcactatatggaggtggcccgccgggtgggccccgcgatcctcgac
ggcagacccgtgagcaccgcagaccggatcgcctactggatcggcgacaagctgatctac
gggccgctgaagaacacgctcggcttctcgcgcgtgcgggtgggctataccgcgggagag
gccatcgggcccgagatcttcgacttctaccgttcgctcggcatcaacctgaagcagctc
tacggccagaccgaggcctcggtcttcatcacccagcagcccgacgggcaggtgcgttcg
gacacggtgggcgtgccctcgcccggcgtcgaggtgcggatcgcagagaccggcgaggtc
ttctaccgctcgcccggcaccttcgtggcctattacaagaaccccgaaagcaccgcctcg
accaaggacgccgagggctgggtcgccaccggcgacgcgggcttcttcgaggaggccacc
ggccacctgcggatcatcgaccgcgccaaggacgtgggcaagatggccgacgggcggctc
ttcgcgccgaaatatgtcgagaacaagctgaagttctatccctcgatcctcgaggccgtg
gtcttcggcaacgggcgcgagcgctgcaccgccttcctcaacatcgacctcgccgccgtg
ggcaactgggccgagcgcaacaacatcgcctattcctcctatcaggagctggcgggccac
ccgaaggtctacgagatgatgaagggccatgtggaggaggtgaaccgctccgtggccgag
gatccgatgctgtcgggctgccagatccaccgcttcctgatcctgcacaaggagctggac
gccgacgatggcgagatgacccgcacccgcaaggtgcgccgcaaggtgatcgaggagaaa
tacgacgacctgatcgctgcgctctacgacgggcgaaccagcatccacaccgagaccgag
gtcacctacgaggacggccgcaagggcgcgatccgcgccacgctgaggatcgaggacgcc
gccacccacggcgcctccgcgcagaggatggctgccgaatga
DBGET
integrated database retrieval system
