Cereibacter sphaeroides ATCC 17029: Rsph17029_2175
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Entry
Rsph17029_2175 CDS
T00484
Name
(GenBank) Ku domain protein
KO
K10979
DNA end-binding protein Ku
Organism
rsh
Cereibacter sphaeroides ATCC 17029
Pathway
rsh03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Rsph17029_2175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsh03400
]
Rsph17029_2175
DNA repair and recombination proteins [BR:
rsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Rsph17029_2175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ABN77278
LinkDB
All DBs
Position
1:2306512..2307300
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AA seq
262 aa
AA seq
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MAPRSYWKGYLKLSLVTCPVTLMPATSEAERVRFRTLNGRTGHPVVSRYLDAETGDVVDD
DDQVKGYPRSETEHVILEEEELDAVSLESARTIDIDCFVPSDEIAWIWYDRPHYLMPADP
IGEEAFAVIREAMRATDRSGVARLVLGGRERAVLLMPRGEGIILWTLRYGDEVRPEEAYF
GDLAAGKPDAKALTLVKRLIEERTRTWEPGMVEDPVQETLLELIRSKTPKKRSRKAGAKA
PKGGDNVVSIMDALRKSIEGKG
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgcgcagctactggaagggctatctcaaactgtcgctcgtcacctgcccggtg
acgctgatgccggccacctcggaggccgagcgggtgcgcttccgtacgctgaacggcagg
accggccacccggtcgtcagccgctatctcgatgcggaaaccggggatgtggtcgatgat
gacgaccaggtgaagggctatccccgcagcgagaccgagcatgtgatcctcgaggaggag
gaactcgacgcggtctctctcgaaagcgcgcggacgatcgacatcgactgtttcgtgccg
tccgacgagatcgcctggatctggtacgaccgtccgcactatctgatgcccgccgatccg
atcggcgaggaggccttcgccgtgatccgcgaggcgatgcgggccaccgaccgctcaggg
gtcgcccggctggtgctgggcgggcgcgagcgtgccgttctcctcatgccgcgtggcgag
ggcatcatcctctggacgctgcgctatggcgacgaggtgcgccccgaggaggcctatttc
ggcgatctcgcggccgggaagcccgacgcgaaggcgctgacgctcgtcaagcgcctgatc
gaggagcggacgcggacgtgggagcccggcatggtcgaggatccggtgcaggagaccctg
ctcgaactgatccggtcgaagacgccgaagaagcgcagccgcaaggcgggtgcgaaggcg
ccgaagggcggcgacaatgtggtgagcatcatggacgccttgcgcaagagcatcgagggc
aagggctga
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