Cereibacter sphaeroides ATCC 17029: Rsph17029_2198
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Entry
Rsph17029_2198 CDS
T00484
Name
(GenBank) transcriptional regulator, NifA, Fis family
KO
K02584
Nif-specific regulatory protein
Organism
rsh
Cereibacter sphaeroides ATCC 17029
Pathway
rsh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rsph17029_2198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsh03000
]
Rsph17029_2198
Transcription factors [BR:
rsh03000
]
Prokaryotic type
Helix-turn-helix
Other families
Rsph17029_2198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
GAF
AAA_2
Mg_chelatase
AAA
AAA_16
AAA_7
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABN77301
LinkDB
All DBs
Position
1:complement(2328638..2330383)
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AA seq
581 aa
AA seq
DB search
MDTSAARSGAVAERGEEYLTLDALCEIAKLLTGASDPIACMPAVFGVLGAFMGLRHGALA
LLQEGAQAETQRNARHVNPYVIAATASGVPPAGAEARAIPAQVARHVFRNGVSLVSCDIL
EEFGAEALPPGLGDSRQALVAVPIRDQANSPFVLGVLCAYRSLKDNGARYLDTDLRVLNM
VAAVLEQSIRFRRLVARDRDRIVQEAREAIRVAAEATAGPPVEAPAEALEGVIGSSPAIQ
RVIGQIRKVAGTHTPVLLRGESGTGKEVFARALHALSERRDKAFIKVNCAALSQSLLESE
LFGHEKGSFTGAVQQKKGRFEMAEGGTLFLDEIGEISLEFQAKLLRILQEGEFERVGGTR
TLRVDVRLVTATNKDLERAVANGTFRADLYFRICVVPIVLPPLRDRKEDIGLLAQGLLER
FNKRNGMKKKLHPSAVAALAQCNFPGNVRELENCIARVAALSPETVIHADDLACHHDHCL
SADLWRLQTGSASPVGGLAQGPLELPVLGSRPPAAAPSAPPPPPPTVPSAPLDGEAAERE
ALIEAMERAGWVQAKAARLRGMTPRQIGYALKKYNIRVEKF
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggacacgtccgcggcacggtccggcgcagtggccgaacggggtgaggaatatctgacc
ctcgacgcgctctgcgagatcgccaagcttctgaccggcgcgagcgatccgatcgcctgc
atgcccgcggtgttcggggtgctgggcgccttcatgggtctgcggcacggtgcgctcgcc
ctcctgcaggagggggcgcaggccgagacccagcgcaatgcccgccacgtcaatccctat
gtgatcgcggccaccgcctcgggcgtgccgcccgccggggccgaggcccgcgcgatcccc
gcgcaggtggcgcggcatgtcttccgcaacggcgtgtcgctcgtctcctgcgacatcctc
gaggagttcggcgccgaggcgctgccgccgggtctcggcgacagccggcaggcgctggtg
gcggtgccgatccgcgatcaggccaattcgcccttcgtgctgggcgtgctctgcgcctac
cgcagcctcaaggacaatggcgcgcgctacctcgacaccgacctgcgcgtcctgaacatg
gtggcggcggtgctcgaacagtcgatccgcttccgccgtctcgtcgcccgcgaccgcgac
cggatcgtgcaggaggcgcgcgaggcgatccgggtcgcggccgaggcgaccgcgggcccg
cccgtcgaggcgcccgccgaagcgctcgagggggtgatcggctcctcgcccgccatccag
cgcgtgatcggccagatccgcaaggtggcgggtacccacacgcccgtcctgctgcgcggc
gaaagcggcaccggcaaggaggtcttcgcccgcgcgctccatgcgctgtccgagcggcgc
gacaaggccttcatcaaggtcaactgcgcggcgctgagccagtcgctgctcgaatccgaa
ctgttcggacatgagaagggctccttcaccggcgccgtccagcagaagaagggccggttc
gagatggccgagggcggcacgctgtttctcgacgagatcggcgagatcagcctcgagttt
caggccaagctcctgcgcatcctgcaggagggcgagttcgagcgggtggggggcacgcgc
acgctgcgcgtcgatgtccggctggtgacggcgacgaacaaggatctcgagcgggcggtg
gcgaacggcactttccgcgccgacctctatttccgcatctgcgtggtgcccatcgtgctg
ccgccgctgcgcgatcgcaaggaggacatcggccttctggcgcagggcctgctcgagcgg
ttcaacaaacgcaacgggatgaagaagaagctgcatccctcggccgtggccgcgctcgcc
cagtgcaacttccccggcaacgtgcgcgagctcgagaactgcatcgcgcgtgtggcggcc
ctctcgcccgagacggtgatccacgccgacgatctggcctgccaccacgaccattgcctg
tcggccgatctctggcggctccagaccggatcggcctcgccggtgggcgggcttgcgcag
gggccgctggagctgccggttctgggcagccgcccgcccgcagccgcccccagcgcgccg
ccgcccccgccgccgaccgtcccctccgcgccgctcgacggcgaggcggccgagcgggag
gccttgatcgaggcgatggagcgggccggctgggtgcaggccaaggccgcgcgcctgcgc
ggcatgaccccgcgccagatcggctatgcgctgaagaaatacaacatccgggtcgagaag
ttctag
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