Cereibacter sphaeroides ATCC 17029: Rsph17029_2225
Help
Entry
Rsph17029_2225 CDS
T00484
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rsh
Cereibacter sphaeroides ATCC 17029
Pathway
rsh03030
DNA replication
rsh03430
Mismatch repair
rsh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rsph17029_2225
03430 Mismatch repair
Rsph17029_2225
03440 Homologous recombination
Rsph17029_2225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsh03032
]
Rsph17029_2225
03400 DNA repair and recombination proteins [BR:
rsh03400
]
Rsph17029_2225
Enzymes [BR:
rsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rsph17029_2225
DNA replication proteins [BR:
rsh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rsph17029_2225
DNA repair and recombination proteins [BR:
rsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rsph17029_2225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
PAS
RNase_H_2
PAS_4
Motif
Other DBs
NCBI-ProteinID:
ABN77328
LinkDB
All DBs
Position
1:complement(2356414..2358501)
Genome browser
AA seq
695 aa
AA seq
DB search
MLDRLNLRVRILLFFAALAGGANVAVAIGLFLAYRRLDAPELLPAFEQVGLVAGLVILGL
VTWIWYLFDANVALPIIRLASKLRARAHARIDGGIEEPTARYLGDLAPAASATALTLAET
RDALAESVARETSRLSSEKARLEALLSDVPVGLLLCSGDHQLVFYNGPATDLMNTAGAPG
LDRNLFDYLRDGPIRHAHRRLIEAGDPDAASDILCTTVVGARVLAARMRLIGGETTKPGY
VLTLRDVTSALASYARREALLAEVFDRIRRPAANLQTLFEVLPPGSCPPPDMDRALRQEA
AGLAAAVTELGARHDESRHDGWPLSLTRASDLLDGLHARMEQAGLSAEIGEAPLLLRCNG
FEVIGLVATLAARVAARRTGHDFRVTLTEDGTEAMLRLVWHGEPLPVGLLEDWLGEPLEP
GVPEVTGRTVLSTHTTEIWPEPAGAGASALCLPLRTARRTGRRPRPIPRAVVYDFELLSK
ARYEKVAEARLEDLTYVVFDTETTGLMPSQDEIVQIAAVRIVNGRRVEAEVLDTLVNPHR
PIPPSSTEVHGITDAMVAEAPDIVEVGRRFHKFAEGAVLVAHNAPFDMEFLRRAEPLIGR
RFDNPILDTVLLSAVLFGQSDVHSLDALTHRIGITIPEEARHTAIGDTVATADAFLKLLP
MLQGRGFETFGAVLSEVRRHGRLLKDLNEPHLTDA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccgcctcaacctgcgcgtgcggatcctgctcttcttcgcggcgctcgcgggc
ggggcgaatgtggcggtggcgatcgggctcttcctcgcctaccggcgcctcgacgccccc
gagcttctgcccgccttcgagcaggtgggtctggtggcggggctcgtgatcctcgggctc
gtcacctggatctggtatctcttcgacgccaatgtggcgctgccgatcatccggctggcc
tcgaagctgcgcgcccgcgcccatgcccgcatcgacggcggcatcgaggagccgaccgcc
cgctatctgggcgatctggcgccggccgcctcggcgaccgccctcaccctcgccgagacg
cgcgacgcgctggccgagtcggtggcgcgcgagacctcgcggctgtcctcggagaaggcg
cggctcgaggcgcttctgtcggacgtgccagtggggctgctgctctgctcgggcgaccat
cagctcgtcttctacaacggccccgccaccgatctgatgaatacggccggcgcgccgggg
ctcgaccgcaacctcttcgactatctgcgcgacgggccgatccgccatgcgcaccggcgg
ctgatcgaggcgggcgacccggatgcggcctcggacatcctctgcaccacggtcgtgggg
gcgcgggtgctggccgctcggatgcggctgatcggaggcgagacgacgaagcccggctat
gtgctcacgctgcgcgacgtgacctcggcgctggcctcctacgcccggcgcgaggccctg
ctggccgaggtcttcgaccggatccggcggccggcggcgaacctccagacgctgttcgag
gtgctgccgcccggcagctgcccgccgcccgacatggaccgcgcgctgcggcaggaggcg
gcgggtctcgccgccgccgtgaccgagctcggcgcgcgccacgacgagagccgccacgat
ggctggccgctgtcgctcacccgcgcctcggacctgctcgatgggctgcacgcccggatg
gagcaggcgggcctctcggccgagatcggcgaggcgccgctcctcctgcgctgcaacggc
ttcgaggtgatcggcctcgtggcgacgctggccgcccgggtggcggcgcggcgcaccggc
cacgatttccgcgtgaccctgaccgaggacggcaccgaggccatgctgcggctcgtctgg
cacggcgagccgctgcccgtgggccttctcgaggactggctcggcgagccgctcgagccg
ggcgtgcccgaggtgacggggcgcacggtgctctcgacccacacgaccgagatctggccc
gagcccgcgggggccggcgcctccgccctctgcctgccgctgcgcaccgcgcgccgcacg
ggccgccgcccgcggcccattccgcgcgccgtggtctatgatttcgagcttctgtcgaag
gcgcgttacgagaaggtggccgaggcgcggctcgaggatctgacctatgtggtcttcgat
accgagacgacgggcctcatgccctcgcaggacgagatcgtgcagatcgcggcggtgcgg
atcgtgaacggccgccgggtcgaggccgaggtgctcgacacgctggtcaatccgcaccgg
ccgatcccgccctcctcgaccgaggtccatggcatcaccgatgcgatggtggccgaggcg
cccgacatcgtcgaggtggggcgccgcttccacaagttcgccgaaggcgcggtgctggtg
gcccacaacgcccccttcgacatggaattcctgcgccgggccgagccgctgatcggccgc
cgcttcgacaatccgatcctcgataccgtgctgctctcggcggtgctcttcgggcagagc
gacgtgcacagtctcgacgcgctgacccaccggatcggtatcaccatccccgaggaggcg
cggcacacggccatcggcgacacggtggccacggcggatgcgttcctcaagctgctgccg
atgctgcaggggcgggggttcgagaccttcggcgccgtgctctcggaggtgcgccggcac
ggacggctgctcaaggatctgaacgagccgcatctgaccgacgcctga
DBGET
integrated database retrieval system
