Cereibacter sphaeroides ATCC 17029: Rsph17029_2481
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Entry
Rsph17029_2481 CDS
T00484
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rsh
Cereibacter sphaeroides ATCC 17029
Pathway
rsh00260
Glycine, serine and threonine metabolism
rsh00460
Cyanoamino acid metabolism
rsh00630
Glyoxylate and dicarboxylate metabolism
rsh00670
One carbon pool by folate
rsh00680
Methane metabolism
rsh01100
Metabolic pathways
rsh01110
Biosynthesis of secondary metabolites
rsh01120
Microbial metabolism in diverse environments
rsh01200
Carbon metabolism
rsh01230
Biosynthesis of amino acids
rsh01240
Biosynthesis of cofactors
rsh04981
Folate transport and metabolism
Module
rsh_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Rsph17029_2481
09102 Energy metabolism
00680 Methane metabolism
Rsph17029_2481
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Rsph17029_2481
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Rsph17029_2481
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Rsph17029_2481
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Rsph17029_2481
Enzymes [BR:
rsh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Rsph17029_2481
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ABN77583
LinkDB
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Position
1:complement(2615161..2616456)
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AA seq
431 aa
AA seq
DB search
MNAPHRDDGFFTESLSSRDPELFASITGELGRQRDEIELIASENIVSRAVMEAQGSVMTN
KYAEGYAGKRYYGGCDYVDVAETLAIERAKQLFGCAYVNVQPNSGSQANQGVFQALIKPG
DTILGMELASGGHLTHGAAPNQSGKWFNAVQYGVRQQDQLIDYDQVAALAREHKPKLIIA
GGSAIPRQIDFARFRAIADEVGALLMVDMAHFAGLVAGGAHPSPFPHADVATTTTHKTLR
GPRGGMILTNSEEIAKKVNSAIFPGIQGGPLMHVIAAKAVAFGEALRPEFKAYAAQVVKN
AQALADELMKGGLDIVTGGTDTHLMLVDLRPKGVKGNATEKALGRAHITCNKNGIPFDPE
KPTVTSGVRLGTPAGTTRGFGEAEFREIGRLIVEVVDGLAANGEEGNAAVEEAVKAKVAA
LCARFPLYPTL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccccgcaccgcgacgacggcttctttaccgaaagcctctcttcccgcgatccc
gagcttttcgcctcgatcaccggcgaactcggccgccagcgcgacgagatcgagctgatc
gcctcggagaatatcgtgagccgcgccgtgatggaggcgcagggctcggtcatgacgaac
aagtacgccgaaggctatgcgggcaagcgctattacggcggctgcgactatgtcgacgtg
gccgagacgctggccatcgagcgggcgaagcagctgttcggctgcgcctatgtgaacgtg
cagccgaactcgggcagccaggccaaccagggcgtgttccaggcgctcatcaagccgggc
gacaccattctgggcatggagctcgcctcgggcggccacctcacccacggggccgcgccg
aaccagtccggcaagtggttcaacgcggtgcagtatggcgtgcgccagcaggaccagctg
atcgactacgatcaggtggcggcgctcgcgcgcgagcacaagcccaagctcatcatcgcg
ggcggctcggccatcccgcgccagatcgacttcgcccgcttccgcgccatcgcggatgag
gtgggcgcgctcctgatggtggacatggcccacttcgccggtctcgtggcaggcggcgcc
catccctcgcccttcccgcatgcggacgtggccaccaccacgacgcacaagacgctgcgc
ggcccgcgcggcggcatgatcctgacgaacagcgaggagatcgcgaagaaggtcaactcg
gccatcttcccgggcatccagggcggtccgctgatgcatgtgatcgcggccaaggcggtg
gccttcggcgaggcgctgcggcccgagttcaaggcctatgccgcgcaggtggtcaagaac
gcgcaggcgctggcggacgagctgatgaagggcgggctcgacatcgtgacgggcggcacc
gacacgcacctgatgctcgtggacctgcggcccaagggcgtgaagggcaacgcgaccgag
aaggcgctgggccgcgcccacatcacctgcaacaagaacggcatcccgttcgaccccgag
aagccgaccgtgacctcgggcgtccggctcggcacgcccgcgggcaccacccgcggcttc
ggtgaggcggagttccgcgagatcggccggctgatcgtcgaagtggtcgacgggctcgcg
gccaacggcgaagagggcaatgcggcggtggaagaggccgtgaaggccaaggtcgcggcg
ctctgcgcccgcttcccgctctatccgacgctctga
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