Cereibacter sphaeroides ATCC 17029: Rsph17029_2605
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Entry
Rsph17029_2605 CDS
T00484
Name
(GenBank) putative DNA topoisomerase I protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rsh
Cereibacter sphaeroides ATCC 17029
Brite
KEGG Orthology (KO) [BR:
rsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsh03032
]
Rsph17029_2605
03400 DNA repair and recombination proteins [BR:
rsh03400
]
Rsph17029_2605
Enzymes [BR:
rsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Rsph17029_2605
DNA replication proteins [BR:
rsh03032
]
Prokaryotic type
DNA Topoisomerases
Rsph17029_2605
DNA repair and recombination proteins [BR:
rsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Rsph17029_2605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
RE_XamI
Motif
Other DBs
NCBI-ProteinID:
ABN77707
LinkDB
All DBs
Position
1:2745378..2746385
Genome browser
AA seq
335 aa
AA seq
DB search
MSDGSEAIVPRGLVYVTDAEPGITRRRCGRGFVFRGPDGRLLDRAERARILRLGVPPAYE
KVWICPLENGHLQATGFDARGRKQYRYHPDWGSWRSQAKYALLPAFGEALPRLRRRVARD
LKAEAGELAFSLAALTMLIDRTFLRVGSSAYAEENKTFGATTLLARHVKLKDGEVRLDFR
AKGGKRVRQVLKDRRLHRILQEIEDLPGRNLFTWIDEESQVRRVASHHVNDYLAEATGLA
GASAKTFRTWGGSLAAFAVARATEGKLTVKMMAEGAAERLHNTPTISRTSYIHPRILGLA
DLNPDERLAQLEAVQPADLPDLRSDERRMLGFLLG
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacggcagcgaggccatcgtgccgcgcggcctcgtctatgtcaccgatgccgag
cccggcatcacccggcggcgctgcgggcgcggcttcgtcttccgcggccccgacggcagg
cttctcgaccgcgccgagcgcgcacgcattctgcgcctcggggtcccgcccgcctacgag
aaggtgtggatctgcccgctcgagaacggccatctgcaggccaccgggttcgatgcgcgc
gggcgcaagcagtatcgctaccaccccgactggggcagctggcggtcgcaggcgaaatac
gccctcctgccggccttcggcgaggcgctgccccgcctgcgccgccgcgtggcccgcgac
ctcaaggccgaggcgggcgagctcgccttctcgctcgcggccctcaccatgctgatcgac
cggaccttcctgcgcgtgggcagctcggcctatgccgaggagaacaagaccttcggcgcc
accacgcttctggcgcgccatgtgaagctcaaggacggcgaggtgcggctcgacttccgc
gccaagggcggcaagcgcgtgcgtcaggtgctgaaggaccgccgcctgcaccgcatcctg
caggagatcgaggacctgccgggccgcaacctcttcacctggatcgacgaggagagccag
gtgcggcgcgtggcttcgcaccatgtgaacgactatctggccgaggccacgggccttgcg
ggtgcttccgccaagaccttccgcacctggggcggctcgctcgccgccttcgccgtggcc
cgagcgaccgagggcaagctcaccgtgaagatgatggccgaaggcgcggccgagcggctg
cacaacacgccgacgatcagccgcacatcctacatccatccccggatcctcggcctggcg
gacctgaaccccgacgagcggctcgcgcagctcgaggcggtccagcccgccgacctgccc
gacctgcgcagcgacgagcgccggatgctcggcttcctgctgggctga
DBGET
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