Cereibacter sphaeroides ATCC 17029: Rsph17029_2689
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Entry
Rsph17029_2689 CDS
T00484
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rsh
Cereibacter sphaeroides ATCC 17029
Pathway
rsh03030
DNA replication
rsh03410
Base excision repair
rsh03420
Nucleotide excision repair
rsh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rsph17029_2689
03410 Base excision repair
Rsph17029_2689
03420 Nucleotide excision repair
Rsph17029_2689
03440 Homologous recombination
Rsph17029_2689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsh03032
]
Rsph17029_2689
03400 DNA repair and recombination proteins [BR:
rsh03400
]
Rsph17029_2689
Enzymes [BR:
rsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rsph17029_2689
DNA replication proteins [BR:
rsh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Rsph17029_2689
DNA repair and recombination proteins [BR:
rsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Rsph17029_2689
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rsph17029_2689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ABN77791
LinkDB
All DBs
Position
1:2837611..2840424
Genome browser
AA seq
937 aa
AA seq
DB search
MTFGKGHHLHLIDGSAFIFRAYHALPPLTRKSDGLPVGAVAGFCNMLFRYVENNKGPDAP
THVAVIFDHSSKTFRNEIYPLYKAQRPEPPEDLRPQFPLTREATRAFNIACIETEGFEAD
DIIAALSCKARDAGGSVTILSSDKDLMQLVGDGVEMLDPMKNKRIGRDEVFEKFGVYPER
VVDVQALAGDSIDNVPGAPGIGIKTAALLIQEYGDLESLLARAGEIKQPKRRAAIEENAE
QIRISKRLVALDCNTPLTFSLEDLEVRLPVADDLLGFLNRMEFRTLTTRVAASLKVEPPP
APTAAVLRNEGVPEIVEQVEAALPFDSASYACVRDAEALAAWIARIRDLGHVAIDTETTS
LDEMRAELVGISLCVEAGAACYIPLGHRAGGGDLFGASELVADQMPLGLALSMLKPVLED
ESILKIGQNMKYDAKILARHGIRVAPIDDTMLMSYAMHAGRHGHGMDELCDTYLGHKPIA
IKTLLGSGKSQITFDRVPVEQAVCYAAEDADVTFRLWKLFKPQLHRARVTTVYETLERPL
VPVLAEMEMAGVQVDRDTLSRMSNAFAQKMAGLEAEIHALAGGPFNVGSPKQLGEILFEK
MGLPGGQKGKNGAWGTGADVLEDLAAEGHDLPARVLDWRQLSKLKSTYTDALQEHIHPET
GRVHTSYSIAGANTGRLASTDPNLQNIPVRSEEGRRIREAFVAPPGKLLVSLDYSQIELR
ILAHIADIPALKQAFREGHDIHAMTASEMFNVPLEGMDPMIRRQAKAINFGVIYGISGFG
LARNLRIPRADAQGFIDRYFERFPGIRGYMDETISFAKANGHVETLFGRRINTPEINAKG
PGAGFARRAAINAPIQGTAADVIRRAMIRMPKAIRGMPATMLLQVHDELLFEVEEEAADA
LIERVREVMEGAADPAVKLTVPLTVEAGRGLNWAAAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcggcaagggccaccatctgcatctcatcgacggttcggccttcatcttccgg
gcctaccatgcgctgccgccgctgacgcggaagtcggacggcctgcccgtgggcgcggtc
gcgggcttctgcaacatgctgttccgctatgtcgagaacaacaagggcccggacgcgccg
acccatgtggcggtgatcttcgaccattcctcgaagaccttccgcaacgagatctacccg
ctctacaaggcgcagcgccccgagccgcccgaggatctgcgcccgcagttcccgctcacg
cgcgaggcgacacgggccttcaacatcgcctgcatcgagaccgaagggttcgaggccgac
gacatcatcgcggccctctcgtgcaaggcgcgcgacgcgggcggctcggtcacgatcctg
tcctcggacaaggatctgatgcagctggtgggcgacggcgtcgagatgctcgacccgatg
aagaacaagcgcatcggccgcgacgaggtgttcgagaaattcggcgtctaccccgagcgc
gtggtggatgtgcaggcgctggcgggcgattccatcgacaacgtgccgggtgcgccgggc
atcggcatcaagacggccgcgctgctgatccaggaatacggcgatctcgagagcctgctc
gcgcgggcgggcgagatcaagcagcccaagcgccgcgccgccatcgaggagaatgccgag
cagatccgcatctcgaagcggctggtggcgctcgactgcaacaccccgcttacgttctcg
ctcgaggatctcgaggtgcgtctgccggtggccgacgaccttctgggctttctcaaccgg
atggaattccgcaccctgacgacccgtgtggccgcgagcctgaaggtcgagccgcctccc
gcccccaccgccgccgtcctccggaacgagggcgtgcccgagatcgtcgagcaggtcgag
gcggcgctgcccttcgacagcgcctcctatgcctgcgtccgcgacgccgaggcgctggcc
gcctggatcgcgcgcatccgcgatctgggccatgtcgccatcgacaccgagaccaccagc
ctcgacgagatgcgcgccgaactcgtggggatctcgctctgcgtcgaggcgggggccgcc
tgctacatccccctcggccaccgggctggcggcggcgatctcttcggcgcctcggagctc
gtggccgaccagatgccgctgggtctggcgctgtcgatgctgaagcccgtgctcgaggat
gagtccatcctcaagatcggccagaacatgaagtacgacgcgaagatcctcgcgcgtcac
ggcatccgggtggcgccgatcgacgatacgatgctcatgtcctacgcgatgcacgcgggc
cgccacggccacgggatggacgagctctgcgacacctacctcggccacaaacccatcgcg
atcaagacgctgctgggttcgggcaagagccagatcaccttcgaccgggtgccggtcgag
caggccgtctgctacgcggccgaggatgcggatgtgaccttccggctctggaagctgttc
aagccgcagctgcaccgcgcccgggtgacgacggtctacgagacgctcgagaggccgctg
gtgccggtgctggccgagatggagatggcgggcgttcaggtcgaccgcgacacgctctcg
cgcatgtcgaacgccttcgcgcagaagatggcgggactcgaggccgagatccacgcgctg
gcgggcggcccgttcaacgtgggcagccccaagcagctgggcgagatcctgttcgagaag
atgggcctgcccgggggtcagaagggcaagaacggcgcctggggcaccggggccgacgtg
ctcgaggatctggcggccgaggggcacgacctgcccgcgcgcgtgctcgattggcgccag
ctctccaagctgaaatcgacctacacggatgcgctgcaggagcatatccaccccgagacg
ggccgcgtccacacctcctattccatcgccggagcgaacacgggccgcctcgcctcgacc
gatccgaacctccagaacatccccgtgcgcagcgaggagggccgccgcatccgcgaggcc
ttcgtggcgccgccgggcaagcttctggtcagcctcgactacagccagatcgagctgcgc
atcctcgcccatatcgccgacattccggcgctgaagcaggccttccgcgaggggcacgac
atccatgcgatgaccgcctccgagatgttcaacgtgccgctcgaaggcatggatccgatg
atccggcggcaggccaaggccatcaatttcggcgtgatctacgggatctcgggcttcggc
ctcgcacgcaacctgcgcatcccgcgggctgatgcgcagggcttcatcgaccgctatttc
gaacgcttccccggcatccgcggctatatggacgagaccatctccttcgccaaggcgaac
ggtcatgtggaaaccctgttcggacgcaggatcaacacgcccgagatcaatgccaagggg
cccggcgcgggcttcgcgcgccgcgcggccatcaacgcgccgatccagggcacggcggcc
gacgtgatccgccgggcgatgatccggatgccgaaggcgatccggggcatgcccgcgacc
atgctgctgcaggtccatgacgaactgctgttcgaggtggaggaagaggccgctgacgcg
ctcatcgagcgcgtgcgcgaggtgatggaaggtgcggccgacccggcggtgaagctcacc
gtgccgctgacggtggaggcgggccgcggcctgaactgggccgccgcccactga
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