Cereibacter sphaeroides ATCC 17029: Rsph17029_2813
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Entry
Rsph17029_2813 CDS
T00484
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rsh
Cereibacter sphaeroides ATCC 17029
Brite
KEGG Orthology (KO) [BR:
rsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsh03016
]
Rsph17029_2813
Enzymes [BR:
rsh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Rsph17029_2813
Transfer RNA biogenesis [BR:
rsh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Rsph17029_2813
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ABN77915
LinkDB
All DBs
Position
1:2963352..2963966
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AA seq
204 aa
AA seq
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MTIHLHRNDLPDGLALGPVVAIDTETMGLDPRRDRLCVVQLSAGDGDAHLVQIERGQTSA
PNLERLLTDPQVLKLFHFGRFDIAALKRAFGVRTEPVWCTKIASKMVRTFTDRHGLKYLL
LELVGVDVSKQQQTSDWGAAELTDAQKDYAASDVLHLHRLKDELEARLLREGRMELAQRC
FDFLPTRAELDLMGWDEPNDIFHH
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
gtgacaatccatctgcatcgcaacgacctgccggacggtctcgccctcggcccggtcgtg
gccatagacaccgagaccatgggcctcgacccgcggcgcgaccgtctctgcgtcgttcag
ctctcggcgggcgacggcgatgcgcatctggtgcagatcgagcgcgggcagaccagcgcc
cccaatctcgagcgtcttctgaccgacccgcaggtgctgaagctgttccatttcggccgg
ttcgacatcgccgccctgaagcgggccttcggcgtgcgcaccgagcccgtctggtgcacc
aagatcgcctcgaagatggtgcgaaccttcaccgatcggcacgggctgaaatatctgttg
ctcgaactggtcggcgtggacgtctcgaagcagcagcagacctccgactggggcgcggcc
gagctgacggatgcgcagaaggactatgccgcctccgacgtgctccatctgcaccggctc
aaggacgagctggaggcacggctgctgcgcgagggccggatggaactggcgcaacgctgt
ttcgatttccttcccacgcgggcagagctcgacctcatgggctgggacgaaccgaatgac
atcttccaccactga
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