Cereibacter sphaeroides ATCC 17029: Rsph17029_3068
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Entry
Rsph17029_3068 CDS
T00484
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rsh
Cereibacter sphaeroides ATCC 17029
Pathway
rsh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rsph17029_3068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsh03400
]
Rsph17029_3068
Enzymes [BR:
rsh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Rsph17029_3068
DNA repair and recombination proteins [BR:
rsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Rsph17029_3068
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ABN78168
LinkDB
All DBs
Position
2:complement(81431..82198)
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AA seq
255 aa
AA seq
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MRIATFNVNGVNGRLPVLLRWLEEARPDVVCLQELKAASARFPAAALEAAGYGAVWHGQK
SWNGVAILARGAEPVQTRQDLPGVQDGESRYIEAAVEGVLVGCLYLPNGNPAPGPKFAAK
LAWFDHLLNHAEELLRHDVPVVLAGDFNVMPTDLDVYRPERWREDALFRPEVRAAFARLL
AQGWTDSIRHLYPEDRIYTFWDYFRNAWERDAGLRLDHLLLSPSLLTRLKGAGVDRHVRG
WEKASDHAPAWIEIA
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcgcgaccttcaacgtgaacggggtgaacggccggcttccggtgctgctgcgc
tggctcgaggaggcgcgccccgacgtcgtctgcctgcaggagttgaaggcggcctccgcg
cgctttccggccgccgcgctggaagctgcgggctacggggcggtgtggcacgggcagaag
agctggaacggcgtggcgatcctcgcgcgcggcgccgagccggtgcagacgcggcaggat
ctgccgggcgtgcaggacggtgaaagccgctatatcgaggcggcggtggagggcgttctc
gtgggctgcctctatctgccgaacggcaatccggccccgggcccgaagtttgccgccaag
ctcgcgtggttcgaccatcttctcaatcatgccgaggagctcctgcgccacgacgtgccg
gtggttcttgccggagacttcaacgtgatgccgaccgatctcgacgtctaccgtcccgag
cgctggcgcgaggacgcgctgttccgccccgaggtgcgggcagcctttgcccggcttctc
gcgcagggttggacagatagcatccggcatctgtatcccgaggatcggatctatacgttc
tgggactatttccgaaatgcgtgggagcgggacgccggtctgcggctcgaccatctgctg
ctgagcccgtcccttctgacccgtctgaagggggcgggggtcgaccggcatgttcgcggc
tgggagaaggcgagcgatcacgctccggcatggatcgagatagcctga
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