Cereibacter sphaeroides ATCC 17029: Rsph17029_3206
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Entry
Rsph17029_3206 CDS
T00484
Name
(GenBank) Superfamily I DNA and RNA helicases-like protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rsh
Cereibacter sphaeroides ATCC 17029
Pathway
rsh03420
Nucleotide excision repair
rsh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Rsph17029_3206
03430 Mismatch repair
Rsph17029_3206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsh03400
]
Rsph17029_3206
Enzymes [BR:
rsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Rsph17029_3206
DNA repair and recombination proteins [BR:
rsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rsph17029_3206
MMR (mismatch excision repair)
Other MMR factors
Rsph17029_3206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD_C_2
HTH_Tnp_1
Viral_helicase1
UvrD-helicase
Arnt_C
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ABN78303
LinkDB
All DBs
Position
2:complement(255005..256669)
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AA seq
554 aa
AA seq
DB search
MAGSFRFGARVADVARRHGVLAHQLSDWRRQARQGLLALPEEAVEGCERLSLRFARVTAS
AADTGSSDRRLWAACAKLIAEIAQQAQKKNRSAAQSAEDLVDVRFCAVGDDDQNIYDYGG
ASARHILEFEQFFPRHRLSELTQNYRSSGAIVEAAAVIVEKLQDRRKAAVISVDTARRAD
PLQGHYHDPQRPELGRVCLLEAASASIEDQADAACLELLRLAAEVGEKKCNWSSTAVLVR
TRAQAAVLRTALAAHGINISYDLRDIVPFLRIRETILARKALDRSLQDNRWLGRGDLQRL
GENLDIRFGSTWSKAIRRHLEEIGSEIEPGAQVSPEQVLEDFVEWARRWQPDQDGVAVMT
AHSSKGLEFDNVLVLDSGWLGQRREAQDSDRRLLYVAATRARHSLTFVTSATTRGRVLED
LNDAPAILHRKPDESLRPKDPPGIWRPLTLHDVYLSFLAREAAASPGRMETALSTVPTGA
PIAFTPVIHASPGGDFDIRIAGTALEDGHLGRVSRRFRMSMDAGWRDARVYAVVERNRRD
NHEGYRDDCCRDTW
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
gtggccgggagcttccgttttggcgcccgggttgcggatgtggcgcggcggcacggggtg
ctcgcgcaccagctttcggactggcggcgtcaggcgcggcaagggctcctggctctgccc
gaggaagccgtggagggctgtgagcgcctatcgctgcggtttgcccgagtgaccgcttcg
gcggcagacaccgggagttccgaccgtcggctgtgggccgcgtgcgcgaagttgatcgcc
gagatcgcacagcaggcgcagaagaagaaccgctccgctgcccagtccgccgaggatctc
gtcgatgtccggttctgcgccgtcggggacgacgatcagaacatctacgactatggcggc
gccagcgcgcggcacatcctcgagttcgaacagttcttccccaggcaccgtctgagcgag
ctcacgcagaactaccgctcgtcaggcgccatcgtggaggccgcggccgtcatcgtcgag
aagctccaggatcgccggaaggccgccgtgatctccgtggatacggcacggcgcgccgat
ccgctgcagggacactaccacgacccgcagcggcccgaactcgggcgggtctgcctgctt
gaagcggcatcggcctcgatcgaggaccaggcggacgccgcctgcctcgagcttctccgc
ctggcggccgaggtgggcgagaagaaatgtaactggtcctcgactgctgttctcgtgcgc
acccgcgcacaggcagcggttctccgaacggcgctggcggcgcacggcatcaacatctcc
tacgacctccgggacatcgtgcccttcctcaggatccgggagacgatccttgccaggaag
gccctggacaggtccctccaggacaaccgttggctcgggcggggagacctccagcgtctg
ggcgagaacctcgatatccgcttcggctcgacctggtcgaaggcgatccgacgtcatctt
gaagagatcgggtccgagatcgagcccggcgcgcaggtctctccggaacaggtcctcgag
gatttcgtggaatgggcgcggcgctggcaaccggaccaggacggcgtggcggtcatgacg
gcccacagctcgaagggtctcgagttcgacaacgtgctggtcctcgacagcggctggctg
gggcaacggcgcgaggcgcaggacagcgaccggcggctcctctacgtggcggcgacccgc
gcccgtcattccctcaccttcgtgacatccgcgaccacgcggggcagggtgctcgaggac
ctgaatgacgcacccgccatcctgcatcgcaaacccgacgagagcctgaggccgaaggac
ccgccggggatctggcggccactcaccctccacgatgtctatctgtctttcctggcgcgc
gaagcggcagcctctccgggtcggatggagacggccctttcgaccgtgccgaccggtgcc
ccgatcgccttcacgcccgtgatccacgcctctccgggaggagacttcgacatccgaatt
gccggcacggcgctggaggacggacatctcggacgcgtcagccgacggttcaggatgtcc
atggatgcgggctggcgcgatgcgcgggtctatgccgtcgtggagcggaaccgccgcgac
aaccacgaaggctacagggacgactgctgcagagacacgtggtag
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