Cereibacter sphaeroides ATCC 17029: Rsph17029_4047
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Entry
Rsph17029_4047 CDS
T00484
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rsh
Cereibacter sphaeroides ATCC 17029
Brite
KEGG Orthology (KO) [BR:
rsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsh03000
]
Rsph17029_4047
Transcription factors [BR:
rsh03000
]
Prokaryotic type
Helix-turn-helix
Other families
Rsph17029_4047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
GAF
HTH_8
AAA_5
Sigma54_activ_2
HTH_23
HTH_30
HTH_28
HTH_1
HTH_29
HTH_38
HTH_IclR
HTH_17
AAA_16
HTH_Tnp_ISL3
Sigma70_r4
RWP-RK
IclR_C
MarR_2
MerR
HTH_11
HTH_24
HTH_20
HTH_50
Motif
Other DBs
NCBI-ProteinID:
ABN79125
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Position
2:complement(1196750..1198585)
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AA seq
611 aa
AA seq
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MEHELSHVREIEAAAEGRPPGRDRVVVESWLRCLNQHRLDPTARSEAFILPETALREHRQ
RSEALIAIARSGIESLYGLVAGQNYVLLLADRAGVTVEYLGDEAQKQELRRSGLYMGAEW
SEARAGTCALGACIETGEPLVIHQSDHFDATHTGLSCTAAPIYDTLGRLSAVLDISLLSS
PRAKASQSLALKLVTAAARRIEMANLMAENRREWVLRLSASPDFLDVDPEAALSLDGTGR
VLGLTHGAARILAQAAGQDWRAAGGLIGRPVSDFLNVRVDRLDDLMRQRPAAERFIETRD
GHRLFAHAIEPRRAPARTVPAPVSLPPPLRGLAGDEPAMAALLRAAAALAPQRLPILIEG
ETGTGKLTLARAIHAAGRGGPFTVVRCAEIGEEEALLFGRQTGRRQEEGLIAAAHRGTLV
LDKIEDLPPRTQARLLRLAAEGSFLPVGGLRPVPVDVRILSTALPGGAEGLRPDLLHRLG
GAWLRLPPLRARQDRLWLAERLLGSGDRPLSLAPEALAVLASHLWPGNLRELEHLAQRLR
VLVPGAEVGLADLPETIRAGTASGPGVPQAAGAVLAQVLRQTGGNVSEAARRLGVNRSTI
HRQIRRMGVTR
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgagctcagccatgtgcgcgagatcgaggctgcggccgaagggcggccgccc
gggcgcgaccgggtggtggtcgaaagctggctccgctgcctgaaccagcatcggctcgat
ccgaccgcccggtccgaggccttcatcctgcccgagacggcgctgcgcgagcatcgccag
cggtccgaggcgctgatcgccatcgcccggtcggggatcgagagcctctacgggctggtt
gcggggcagaattacgtcctgctgcttgcggaccgggccggggtgacggtggaatatctg
ggcgacgaggcgcagaagcaggaactgcgccggagcggtctctatatgggcgccgaatgg
tccgaggcgcgcgcgggcacctgcgcgctcggcgcctgcatcgagacgggcgagccgctg
gtgatccaccagagcgatcatttcgacgcgacgcacaccggcctctcctgcaccgccgcg
ccgatctacgacacgctcggccggctctcggcggtgctcgacatctcgctcctctcctcg
ccgcgcgcgaaggcgagccagtcgctggcgctgaagctggtgacggcggcggcacggcgg
atcgagatggcgaacctgatggccgagaaccggcgcgaatgggtgctccggctctcggcc
tcgccggatttcctcgatgtggatcccgaggcggcgctgtcgctcgacgggacggggcgg
gtgctggggctgacccatggcgccgcgcggatcctcgcgcaggcggcggggcaggactgg
cgcgcggcgggcgggctgatcgggcggccggtctccgatttcctgaacgtgcgggtggac
cggctcgacgatctcatgcgccagcgccccgcagccgagcggttcatcgagacgcgcgac
ggccaccggctcttcgcccatgcgatcgagccgcgccgcgcgcccgcccggacggtgccc
gcgccggtgagcctgccgccgccgctgcgaggccttgccggcgacgagcccgcgatggcc
gcgctcctgcgggcggccgcggcccttgcgccgcagcggctgccgatcctgatcgagggc
gagaccggcacgggcaagctcacgctcgcccgcgcgatccatgcggcggggcgcggcggt
cccttcacggtggtgcgctgcgccgagatcggcgaggaggaggcgctgctcttcggccgc
cagaccgggcggcggcaggaagaggggctgatcgcggccgcccatcgcggcacgctcgtc
ctcgacaagatcgaggatctgccgccccgcacgcaggcgcgccttctgcgcctcgcggcc
gagggcagcttcctgccggtgggcggcctgcgcccggtgccggtcgacgtgcgcatcctt
tcgaccgcgctgccgggcggggccgaggggctgcggcccgacctcctgcaccggctgggc
ggggcgtggctgcggctgccgccgctgcgggcgcgacaggaccggctgtggctggccgaa
cggctgctcggctcgggcgaccggccgctctcgcttgcgcccgaggcgctggcggtgctg
gcctcgcatctctggcccggcaatctgcgcgaactcgaacatctggcgcagaggctgcgg
gtcctggtgccgggcgctgaggtcggcctcgccgatctgccggagacgatccgggcgggg
accgcgtctggcccaggcgtcccgcaggcggcaggggcggtgctggctcaggtgctgcgc
cagaccgggggcaatgtctccgaagccgcgcgacggctgggcgtcaatcgctcgacaatt
catcgccagatccgccggatgggcgtgacacgctga
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