Runella slithyformis: Runsl_0026
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Entry
Runsl_0026 CDS
T01553
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rsi01002
]
Runsl_0026
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rsi01011
]
Runsl_0026
Peptidases and inhibitors [BR:
rsi01002
]
Cysteine peptidases
Family C82
Runsl_0026
Peptidoglycan biosynthesis and degradation proteins [BR:
rsi01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Runsl_0026
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
DUF1424
CEP15-like
Motif
Other DBs
NCBI-ProteinID:
AEI46486
UniProt:
A0A7U3ZFX3
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All DBs
Position
33833..34996
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AA seq
387 aa
AA seq
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MKRIIQCTFFCFSIFLIDGCRKPEKTEELLLEKLREKKTYAEILSYTHSIGIDTALAAKR
GPLALLEEISYGHKPLHIRYTAKVLMPDSARIREAAWALVEGKTKNIEKVLAELEPSIPA
YVQLKSHYVRFRDSGRADSAAVVAESLNAYRWMNRQAQGAERMVLVNTRGAYLKGFDAAG
NQKLSMRVIVGKKDSPTPNIDTYATNIILYPYWNVPTNIALKEMLPKIKEDAEYLENNGM
AVIDMKGDSVDAHSINWSEISEDNFPYRFRQDTGEDNSLGLLKVNIKNPLAIYLHDTNVR
TLFVSDQRWRSHGCVRLQYPAQLANFLAGEHMLNDDFVNDTLTNQKPKSTKLKQKVPVFI
LYLGADINDAGQLVFFKDIYGRKSGVV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatcattcagtgtacttttttctgtttttccattttcctcatcgacggctgt
cgtaaacccgaaaaaacggaggaattgttactcgaaaagttgcgcgagaaaaagacctac
gccgaaatcctcagctacacccattccatcgggattgatacggcgttggctgccaaaaga
ggtccgctggccttattggaagaaatcagttacggacataaaccgcttcatattcgctat
acggccaaagtactgatgcccgattcggcacgtatccgtgaagcggcctgggccttggtg
gaaggtaaaactaaaaacattgaaaaggtgttggccgagctggaaccttccattcctgcc
tatgtccaactgaaaagccactacgtacgttttcgcgacagcggccgggccgacagtgcc
gccgtggtggccgaatccctcaatgcctaccgctggatgaaccgtcaggcgcagggagcg
gagcggatggtgctggtcaatacccgaggggcgtatttgaaaggctttgatgcggcagga
aatcaaaaactcagtatgcgggtgatcgttggaaaaaaggactctccgacgcccaacata
gatacctacgcgaccaacatcattctgtacccatattggaacgtgccgaccaatattgcc
ctgaaggaaatgttgccgaaaataaaagaagatgcggaatacctggaaaacaacggaatg
gcggtcattgacatgaaaggcgacagcgtagatgcccattccattaattggtctgaaatc
tcggaagataattttccgtatcgcttccggcaggacaccggtgaggataattcgttgggt
ttacttaaagtaaatatcaaaaatccgctggcgatctacctgcacgacaccaacgttcgg
actctttttgtgagtgatcaacgctggcgcagtcacggctgtgtgcggttgcagtatcct
gcgcaactggccaatttcctggcgggagagcacatgttgaatgatgattttgtgaatgat
acgcttacgaatcaaaagccgaagtcaacgaaactcaaacaaaaggtgccggtgtttatc
ctgtatctgggagcggacatcaatgacgccggtcaattggtctttttcaaagatatatac
ggccgtaaaagcggtgtagtttag
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