Runella slithyformis: Runsl_0054
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Entry
Runsl_0054 CDS
T01553
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rsi
Runella slithyformis
Pathway
rsi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Runsl_0054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsi03400
]
Runsl_0054
Enzymes [BR:
rsi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Runsl_0054
DNA repair and recombination proteins [BR:
rsi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Runsl_0054
Prokaryotic type
Runsl_0054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEI46513
UniProt:
A0A7U4E3V0
LinkDB
All DBs
Position
complement(72680..73345)
Genome browser
AA seq
221 aa
AA seq
DB search
MDIKIEASWKERLQTEFEQPYFAELVAFVRQEYATQPIYPPGRLMFNAFDKCPFDQTKVV
ILGQDPYHGKGQANGLCFSVNDGVTIPPSLNNIFKEIKDDLDKPFPRTGNLERWAEQGVL
LLNATLTVREGKPGSHQGHGWERFTDAVIRLLNDDKQGLVFLLWGKYAQDKGKIIDPKKH
FVLKSKHPSPMSANYGGWFGNKHFSQANNYLKNKGLPEIEW
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggatattaagatcgaagcttcgtggaaggagcgattgcaaaccgaatttgaacagcct
tattttgctgagctggtggcttttgttcgtcaggagtacgctacccagcccatttatccg
cccggcagattaatgtttaatgcctttgataaatgcccttttgaccaaactaaagtggtc
attttggggcaggatccctatcatggcaaagggcaggccaatggactgtgcttttcggtc
aatgacggggtgacgattcccccttcgctcaacaatatcttcaaagaaataaaggacgat
ttagacaaaccttttccacgaaccggaaatctggaacgatgggctgagcagggagtcctg
ctgctaaacgccacactgaccgtgcgggagggtaagcccggctcacatcagggccacggc
tgggagcgctttacggatgccgtgatcaggcttctgaatgatgataaacaagggctcgtc
tttttgttatggggcaaatacgcgcaggacaaaggaaagatcattgacccgaaaaaacat
tttgtgctgaaatcaaaacatccctcgccgatgtcggccaactatggcggatggtttggg
aacaaacacttcagtcaggccaataattatttgaaaaacaaagggctgcccgaaattgaa
tggtag
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integrated database retrieval system
