Runella slithyformis: Runsl_0076
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Entry
Runsl_0076 CDS
T01553
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsi03400
]
Runsl_0076
DNA repair and recombination proteins [BR:
rsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Runsl_0076
Archaeal homologous recombinant proteins
Runsl_0076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SbcC_Walker_B
AAA_23
AAA_29
AAA_21
ABC_tran
Toprim_Crpt
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
AEI46535
UniProt:
A0A7U3ZG32
LinkDB
All DBs
Position
95098..98196
Genome browser
AA seq
1032 aa
AA seq
DB search
MIPVKLILQGIQSYREKQEIDFSQLTAAGLFGIFGKVGSGKSTVLEAITFVLYGDTERLN
NRENRSYNLMNLRSDRLYIDLVFRTGHNPTTYRFVAEGKRSGKHFDQVKIDRKAYQWMPE
LNDWSPIAAENPAEKIIGLSYENFKRTVIIPQGRFQEFIELRDADRTRMMKELFQLERFE
LSDRVKRLMNRTENELQHIDGQRKSLGDVTPEVYAQTKTDLQNAQTLLKQGKEQLTRKQN
EEKAIEALMKLFNRLLEIEEEIKKAEAQTELFQQRRQRLQQFEQCQLSFKPLFDRKQDIA
TYIRRDTEKQEVLQKAFDTLQDTLTKNQYALDELRPAHEKCSQSLVEIDDMKTIITLKKA
ETERNTLQKRIEDGKEKFRLRQGALKDRKTSYGKLKENKAALRNQLPDVTVLLEIRNWFD
RKEGLLKEKEALKTQANDIVKKEKISVDAKSALFTEEILKLLPQISREQSFETIYEQIDI
ARRQLTQQAEALNPEILHLNTQKALQQYAGALQDGEPCPLCGAEHHPHTLTADTDYNALI
RQLQQRQEQLKTTAAHTLGQLERQFSKVEKDLALVQSQKQEVKKYWDTKAEEIRAHEALF
KWENADATDRKPVDLALEQAKSLQGTLNEVEKQLETEEKGIQQDEIELKEKYEKPIEKFG
QEIASLDGTIQQATRQLKVLRLEEYSNADVPTLENRAQKREEELKSLIQQFERLDITVRK
QRDEIGPLRGEIAGLKTNIANHQIDLKKITDEIRSLLHANQLASEESVAEILGWKLDAVR
EREVIADFDRNLFALRKERDDLQHTTKDQKLDPELYAALLKEIELLEQSIEKWTGELGRL
TDTEQKQARQLQQQAELLAQKAALELRQTDLKTLEKLFKGSGFVNYVSSVYLQNLCNQAN
ARFHRMTRQQLQLEINESNNFQVRDLLNDGKTRALNTLSGGQKFQAALSLALALADNVNS
QITSQENFFFLDEGFGSLDRESLQTVFDTLKSLRKENRVVGVISHVEEMQQEIDRYLHIT
NDEERGSFVRLF
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgataccggtcaaacttatattacagggcattcagtcgtaccgagaaaaacaggagatt
gatttttcgcaactcaccgccgccggccttttcgggattttcggcaaagtgggcagcgga
aaatcgacggtgctggaagccatcacgtttgtactttacggcgataccgagcgcctcaac
aaccgcgaaaaccgcagctataatctgatgaacctgcgctccgaccggctgtatattgat
ctggtatttcggacgggccacaacccaaccacataccggttcgtggccgaaggcaagcgc
agcggcaagcattttgaccaagtcaagattgaccgcaaagcctatcaatggatgcccgag
ctcaacgactggtcgcccattgcggcggaaaaccccgccgaaaaaatcatcgggctcagt
tacgaaaacttcaaacggaccgtcatcatcccgcaggggcgttttcaggaatttatcgaa
ctccgcgacgccgaccgcacgcgcatgatgaaagaactctttcagctcgaacgttttgaa
ctttcagaccgcgtcaaacggctgatgaaccgtaccgaaaatgaactgcaacacattgac
ggacaacgaaaatcgctgggggacgttacaccggaagtatatgcccaaaccaaaaccgac
cttcagaacgcgcagacgttgctgaaacagggaaaagagcaattgacgcgaaaacaaaac
gaagaaaaggccattgaggccttgatgaaactgtttaaccgtttgcttgaaattgaagaa
gagatcaaaaaagccgaagctcaaaccgaactgtttcaacaacgccgacagcggctgcaa
cagtttgagcagtgtcagctgagtttcaagcctttgtttgaccgcaaacaggatattgcc
acttacatccgacgcgataccgaaaagcaggaagtacttcagaaagcattcgatacctta
caggacacgctgaccaagaatcagtatgccctcgacgaactgcgcccggcccacgaaaaa
tgcagccaaagcttggtcgagattgatgatatgaaaacaatcatcaccctaaaaaaagcg
gaaacggagcgcaacacccttcaaaaacggatcgaagacggcaaagaaaaatttcggctt
cggcagggggcgctcaaagaccgcaaaacgtcctatgggaaactgaaggagaacaaagcc
gcgctccgaaatcaattgcccgacgtgaccgttttgttggagatcaggaattggtttgac
cgaaaagaagggcttttgaaagaaaaggaagccctgaaaacgcaagccaacgacatcgta
aaaaaggagaaaatctccgttgatgccaaatcagcgctgtttacggaagagattctgaag
ttacttccccaaatttcgcgggagcaatcgtttgaaacaatctatgaacaaattgatatc
gcacgtcggcagcttacccaacaggcggaggcgctgaaccccgagattttgcacctcaat
acccaaaaagccctgcaacaatacgccggggccttgcaggacggcgagccctgtccgctc
tgcggtgccgagcaccacccgcacacgctgaccgccgataccgattataacgcactcatt
cgtcagttgcagcagcggcaggaacaactcaaaactaccgctgctcacacgctgggacaa
ctggaaagacaattcagcaaagtggaaaaagacctggcgttggtgcaatcccaaaagcag
gaagtaaaaaagtattgggacacaaaagcggaagagattcgtgcccacgaagccctgttt
aaatgggaaaatgccgatgccaccgaccgcaaaccggtggacctggccctcgaacaggcc
aaatcgcttcaaggcaccctgaatgaggtggaaaaacaactcgaaacggaagaaaaaggc
attcagcaggacgaaatcgaactgaaagaaaagtacgaaaaacccatcgaaaaattcggg
caggaaatagcttctttggacgggaccattcaacaggccacccgccagctcaaagtcctc
cgccttgaggaatacagcaacgcagacgtacccacgctggaaaacagggcgcaaaagcgc
gaagaggagttaaagagcctcatccaacaatttgaaaggctggatatcaccgtgcgaaaa
caacgggatgaaatcggcccgttgaggggcgagatcgcggggttgaaaacaaacatcgcc
aaccaccaaattgacctgaagaagatcaccgacgagattcggagtcttttacacgccaac
caactcgcgtcggaagaaagtgtggcggagattttgggatggaaattagacgcagtacgc
gaacgggaagtaattgcagactttgatcgcaatctgtttgctttgcggaaagagcgcgac
gacctgcaacacaccaccaaagaccaaaagttggacccggaactgtatgcagctttattg
aaagagatcgaactgcttgaacaatccattgaaaaatggacgggtgaactgggaagattg
accgataccgagcaaaaacaagcccggcaattgcagcaacaggccgaattgctcgcccaa
aaagcagccctcgaactgcggcaaaccgacctcaaaacactcgaaaaactctttaaagga
agcggatttgtcaattatgtgtcgtcggtgtatttgcagaatctgtgcaatcaggccaat
gcgcgattccatcgcatgacgcgccaacagctgcaactggaaatcaacgagtccaataac
tttcaggtccgtgatctgctcaacgatggcaaaacccgggcgttaaatacgctctcgggc
gggcagaagtttcaggccgccctatcgctggccttggccctggccgataacgtgaacagt
cagatcacctcgcaggaaaactttttctttttggatgaagggtttggctcactggacaga
gaatcgctgcaaacggtttttgataccttaaaatccctgcgcaaagagaaccgggtcgtg
ggggtgatctcgcacgtggaagaaatgcagcaggaaattgaccgctatctccatatcacc
aacgacgaagaacggggaagctttgtccgccttttctga
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integrated database retrieval system
