Runella slithyformis: Runsl_0120
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Entry
Runsl_0120 CDS
T01553
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsi02000
]
Runsl_0120
Transporters [BR:
rsi02000
]
Other transporters
Pores ion channels [TC:
1
]
Runsl_0120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
Plug
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
AEI46578
UniProt:
A0A7U4E3P5
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All DBs
Position
155692..158058
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AA seq
788 aa
AA seq
DB search
MKNICLFLLLLVGVFARETAAQQAVKGKIFDAVTKEPIVGATVQIGTTNEGTVTDNNGQF
QLKSVSQNAKIRISTVGYTAQELTFTDSKNLTVSLEPAVENLQQIVVTGNREAALRTETP
IAISKLTPKMIDEAKVTSIYEVINKTPGVMMVNLNNEQHSMAIRQPMTTNAYYLYLEDGV
PIRPMGVFNHNSLLEMNQFTVSSIEVVKGPVSSVYGPEAVGGAINFISQRPTAVPTARIG
LQADQWGYRRVQYGAGVTLGQFGIYVGGLAAEQKDAWMTSSDYTKNAQYARMEYHFTPKA
RLIYTLSYAKYDSQTSGSVDSVAFYSRQYVSTTDFTYRKSESLRSRLTFEKDWNNGSQSF
ITVLGRDNKHGQNPSYGIRWTSGAATARGEINSNDFKSLGLIAQHTQRFKFLNSKLTAGT
TVDFSPNDYWSYQIDLAAQLRADKKSVEKYTISKERPDIQIANYSADIRNTAFYVQYDFE
PLPKLRISAGLRYDNMSFDFVNNLDIDKATGQAIGGSKSYTQTTPKLGVTYDVGKGKGIY
ANYSKGFAPSGLTAIFRKRPTPAANGDLFYYNLIPATFTNAEIGGWMSLLKNKIYLDATY
YQMNGTNELLNIRQPDNSTDYRAAGKTLHKGVEFGITYKPSKEVFVRFGGTHSIHRFVEF
ILSQRASDALKDVNGMDMPSAPRWVWNGEVSYYPQWFKNFRTSVEWQHVSKWYQNQINTV
VYNGYDLVNFRAGYQWKGIELFTNIMNLTDALYATNATRGNAATDRTTFTPAAPRTFTVG
MQYNFTGK
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatatatgtttattcctcctgcttcttgtgggagtttttgcccgtgaaacggca
gcgcaacaggccgtcaaaggcaaaatatttgacgccgtcaccaaagaacctatcgtagga
gccaccgttcagatcgggacgacgaatgagggtacagtaacggacaataacggacaattt
cagttgaaatccgtttctcaaaacgccaaaatcagaatttccacggttggctataccgct
caggaactgacctttaccgattcaaaaaacctaacagtttcgctggagcccgccgtagaa
aatctacagcaaattgtggtaacgggcaatcgcgaggccgcgttacgtaccgaaacaccc
attgccatctcaaaactgacccccaaaatgatcgacgaggcaaaggtgacttctatctat
gaggtcatcaacaaaacgcccggcgtaatgatggtcaacctcaacaacgaacaacactcc
atggccatccgtcagccaatgaccaccaatgcctactatctgtatttggaagacggcgta
ccgattcggcccatgggcgtgttcaaccacaactctttgctggaaatgaatcagtttacg
gtcagctcaattgaagtcgtcaaaggcccggtgtcgtcggtgtacggccccgaagctgta
ggcggtgccatcaactttatatcacaacgacccaccgccgtacccaccgcgcggattggc
ctccaggccgaccaatggggctaccgacgcgtgcaatatggcgcaggggttacgttgggc
caatttggtatttatgttggcggcttggcagccgaacaaaaagacgcctggatgacaagc
tctgattacaccaaaaatgcccaatatgcgcgaatggagtatcattttaccccaaaagcg
cgcctgatttataccctttcctacgctaagtatgactcccaaaccagcggcagcgttgac
agcgtcgcgttttacagtcgccaatacgtgagtactaccgactttacctaccgcaaatct
gagtcgctccgctcacgtttgacgtttgaaaaagactggaataacggttctcagtcgttc
ataacggttttgggcagggacaacaaacacggtcagaatccaagctatggcattcgctgg
acaagcggcgctgccacggcgcggggcgagatcaattccaatgatttcaaaagtctgggt
ctcattgcccagcacacccaacgttttaaattcttaaactcaaaactgacggccggaacc
actgtcgatttttcgcccaatgattattggtcgtatcagatagatttggctgcgcagctt
cgagccgataaaaaatcggtcgaaaaatacaccatcagtaaagaacgacctgatattcag
attgccaactacagcgccgatattcgcaatacggccttttatgtgcagtatgactttgaa
cctctgcccaaactgcgcatttcggcgggtcttcgctacgacaatatgtcgtttgatttt
gtcaataatcttgacattgacaaagccaccgggcaggccatcggcggttccaaatcgtac
acccaaacaacgcccaaactgggcgtaacctacgatgtaggaaaagggaaggggatctat
gccaattactctaaaggttttgcaccatcaggtttgacggcaattttcagaaaacgtcct
accccggcagccaacggtgatttgttttattacaacttaattcctgccacttttaccaat
gccgaaatcggcggttggatgtcgttgctgaaaaacaagatctacctggatgccacctat
taccaaatgaacggcaccaacgaattgctcaacatccgccagcccgataattctactgac
taccgggcggcgggaaaaaccctacacaaaggcgtcgaattcggcattacgtataaacct
tccaaagaggtgtttgtgcgtttcggcggcacccattctattcaccgttttgtggagttt
atcctcagccaacgcgcctccgacgccctgaaagatgtcaacggcatggatatgccctcc
gccccgcgttgggtatggaacggcgaagtgagctattatccccaatggttcaaaaacttc
cgcacgtcggtagaatggcagcacgtgagcaaatggtatcagaatcaaatcaatacggtc
gtgtacaacggctatgatctggtcaacttccgggccgggtatcagtggaaaggcattgaa
ctttttaccaacatcatgaatctaaccgacgccttatacgccaccaacgccacgcgcggc
aacgccgccaccgaccgcacgacgtttactcccgccgcaccgcgcacctttacggttggg
atgcaatataattttacggggaaataa
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