Runella slithyformis: Runsl_0176
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Entry
Runsl_0176 CDS
T01553
Name
(GenBank) OmpA/MotB domain protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsi02000
]
Runsl_0176
Transporters [BR:
rsi02000
]
Other transporters
Pores ion channels [TC:
1
]
Runsl_0176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Laminin_G_3
DUF748
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
AEI46633
UniProt:
A0A7U4E3Z7
LinkDB
All DBs
Position
216393..217802
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AA seq
469 aa
AA seq
DB search
MNRLLWCLLLISTTIQTNAQRAGVYQFERNLEEESGKLPPLKVLKEEGIFQQDVLPELKN
VKRSVYVFDKNCGLQFDNRAANGFLKDSYTIEIYFKFAALDSWKRVIDFKNRKSDNGCYI
YDGKLNFYNFALGTRAPVRANEYTHYVISRNGKTKQLKMYVDGEAKVEFTDQNDEGVIDE
DGVLNFFYDDLIVKEEASAGSVAMIKLFDFVVVPTEVKRSFIKLSESVLKKQTVAPITVA
PAPLPVAQTNPPVVANERSLKETSLVLSGQVQNETTRQPVKQPTILVFNKNNVEKHRLKG
TDEGLFKIAGEVGQDLYFMVEADGFFPSSIHYTAKELTEKSKNGTIFTLKPVMVSESIVL
NNIRFAQGKPELLPESAEDLNRLWMFMRDNPSAEIELQGHTDNLGNFDLNLELSRQRVEA
VKAFLISKGIVDQRISGRGFGSTRPVANNNREETRQLNRRVEFIIKKLK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggcttctttggtgtttacttcttatatcgacaacgatacaaaccaacgcccaa
cgggcaggtgtatatcagtttgagcgaaatttggaggaagaatcagggaagctcccccca
ctgaaggtgttgaaagaagaaggcatatttcagcaggacgtccttcccgaactcaaaaat
gtcaaacgctcggtctatgtttttgacaaaaattgcgggcttcaatttgacaaccgcgcc
gccaacggctttctgaaagactcctacaccattgaaatctacttcaaatttgcggctttg
gatagctggaaacgggttattgatttcaaaaaccgcaaatctgacaatggctgttatata
tatgacgggaagctcaacttctacaattttgcattaggcacccgtgcgcccgtacgcgcc
aacgagtatacgcattacgtaatttcccgaaatggcaaaaccaaacagcttaaaatgtac
gtagacggggaagctaaagtggaatttacggatcaaaacgatgaaggtgtaattgacgaa
gacggagtattaaactttttttatgacgacctgatcgtcaaagaagaagctagtgccggg
tcagtagccatgatcaaactatttgattttgtggtcgtacctaccgaagtaaaaaggagt
ttcattaaactgagtgaatccgttctgaaaaaacagaccgttgcccccatcaccgttgcc
cctgctcctcttcctgttgctcaaacgaacccgcctgtcgttgcaaacgaacggtcttta
aaagaaacttcgttggtactgagtggccaggtgcagaacgaaacaacccgacagcccgtc
aaacagccgacaatattggtctttaataaaaacaatgtagaaaaacatcgcctgaaaggg
actgacgaagggttgtttaaaattgcaggtgaggtagggcaagacctctattttatggtc
gaagcggatggcttttttccttcaagtatccattatacggccaaagagttgaccgaaaaa
tcaaaaaacggcactatttttaccctaaagcccgttatggtcagtgaaagtattgtacta
aacaatatccgttttgcacagggaaagcctgaattgcttcctgaatcagcggaagattta
aatcgtttatggatgtttatgcgcgataatccttcggcagagattgaattgcaggggcat
actgacaacttaggcaattttgacctcaatttggaattatccaggcagcgcgtggaagcg
gtcaaagcttttttgatatccaagggaattgtcgaccaacgcatcagcgggcggggcttt
ggctccacgcgccccgtggccaacaataaccgggaagagacccgtcaattgaatcggagg
gttgagttcatcataaaaaaattgaaatga
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