Runella slithyformis: Runsl_0529
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Entry
Runsl_0529 CDS
T01553
Name
(GenBank) protocatechuate 3,4-dioxygenase, alpha subunit
KO
K00448
protocatechuate 3,4-dioxygenase, alpha subunit [EC:
1.13.11.3
]
Organism
rsi
Runella slithyformis
Pathway
rsi00362
Benzoate degradation
rsi01100
Metabolic pathways
rsi01120
Microbial metabolism in diverse environments
rsi01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Runsl_0529
00624 Polycyclic aromatic hydrocarbon degradation
Runsl_0529
Enzymes [BR:
rsi01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
Runsl_0529
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Motif
Pfam:
Dioxygenase_C
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
AEI46973
UniProt:
A0A7U3ZGU7
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All DBs
Position
complement(626579..627103)
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AA seq
174 aa
AA seq
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MKQTPSQTVGPYFAYGLTPEQYLYDFKSLAGNQMVNPIDRKNAITIVGKVFDGEGAVIPD
AMIEIWQNDGENPLFGRFGTGTDPENRFVFHTIKPVAVNGQAPHLSVIVFMRGQLIHSYT
RLYFSDEVTLNERDDVLNSIPAERRNTLIASQNGSVYEFNIRMQGEGETVFFEI
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagactccttcccaaaccgttggcccttattttgcgtatggccttacaccggag
caatatttatatgattttaaaagtttggccggcaatcagatggtcaatcccatcgaccga
aagaatgccattaccatcgtcggaaaagtgtttgatggcgaaggcgctgtcattccggat
gcaatgatcgagatttggcaaaacgacggcgaaaatccattgttcggccgattcgggacc
ggtaccgaccctgaaaatcgttttgtttttcatacgatcaaacccgtcgccgtgaatgga
caggcaccgcatttgtcggtgattgtgtttatgcgcggacagctgatccattcgtacaca
cgtctttatttttcagacgaagtgactctgaatgaacgggatgacgtattaaacagtatt
cctgccgagcgcagaaatacccttattgcttcccaaaatggctcagtatacgaattcaac
atccgtatgcagggcgaaggagaaacggtcttttttgaaatatag
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