Runella slithyformis: Runsl_0628
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Entry
Runsl_0628 CDS
T01553
Name
(GenBank) RagB/SusD domain-containing protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsi02000
]
Runsl_0628
Transporters [BR:
rsi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Runsl_0628
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
TPR_19
AAA_lid_6
Motif
Other DBs
NCBI-ProteinID:
AEI47071
UniProt:
A0A7U3ZH09
LinkDB
All DBs
Position
complement(748117..749625)
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AA seq
502 aa
AA seq
DB search
MKKSIIFSIALSLGAFSCSDDFLTVTPETALSSVTFFKTETDFIQAVNSAYVPLRTLHNI
NSHLLTEQHSDNARYVRNVLFGATENQSNLADFNVPTANGITTNGNVLTAYRQNYLIIAR
ANQVLALIDAATIPDATKRNVKGQALFLRALSYLEIARYFNRGPLQLTPVSVRSEAAAPL
GTGDQLYAQIIKDATEAIGLLPPKSAQEAGRATSGAARALLANVFMIQKKWADAETQLRA
IVTSGEYSLMPNYADAFSNSTSNKNTRESVFEVQYLEGAQGLNGNFLYSMLPLPIAANEL
VTITGTSNPQPLSGEGNNIPTPDLIEAYEPGDRRRDATIGFITLGGALHANKSFPFIRKY
ARPHALHNNHGMNWPIYRYSEVLLFLAEALIEQNKLADATPFINQVRTRAGLANTTAATQ
SALRDAVYQERRVELAFESKRLHDLVRTGRLETVIKAYGDRVKADKFRYYFPSEGFVPSD
AFTNITPYYGLPAAEADLSPNF
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatcaatcatattttctattgcgttaagtttaggagcatttagttgcagtgac
gattttctgacggttacgccggaaaccgcgttgagttcggttacttttttcaaaactgaa
actgacttcatacaggcagtcaacagcgcttacgttccgctgcgtacgcttcacaatatc
aactcacatttgcttaccgagcaacattcggataatgcacgctacgtacgtaacgttttg
tttggagccactgaaaaccagtcaaacttagcggatttcaacgtgcccactgctaacggt
atcactaccaatggtaacgtattgacagcttatcgtcaaaactacctcatcattgcccgt
gccaatcaggtattggcgttgattgatgcagctactattccggatgctaccaaaagaaat
gtaaaaggacaggcactgtttctgagagcgttatcttatttggaaatagcgcgttatttt
aaccgtggaccgcttcaattaactccagttagtgtgcgttcggaggcggcggctccgctt
ggtacaggcgatcagttgtacgctcaaatcatcaaggatgctacggaagcaataggatta
ttacctcccaaatcagcccaggaagcagggcgtgccacttcaggcgccgctcgtgcgctg
ttggccaatgtctttatgattcagaaaaaatgggcagatgccgaaacgcagcttcgggcc
attgtaacaagcggtgagtacagcttaatgcctaattatgccgatgcgttctctaacagt
acaagcaacaaaaacaccagagagtcggtctttgaagtgcagtatttggaaggtgcccag
ggacttaacggcaactttttgtacagtatgctgcctttgcctatcgcagccaatgagttg
gttaccataacgggaacatccaatccccaacccttatcgggggaaggtaataacatccct
acgcctgatttgatagaggcctatgagcccggtgacagacgcagggatgcaacgattggc
tttattaccctggggggagctttgcacgctaacaaatcttttccgttcatcaggaaatac
gcaaggccgcacgcattgcacaacaaccacggcatgaactggcccatttatcgctattca
gaagtgttgttattcttggcagaagcgttgatcgagcaaaataaattggcggatgcaact
ccatttattaaccaagttcgcactcgcgccggactcgctaataccactgctgctactcaa
tcggcattgcgtgatgccgtgtatcaggagcgccgtgtagagttagcatttgaatcaaag
cgcttacacgatctggtacggaccggccgcctcgaaacggttatcaaagcctatggtgac
cgcgttaaagcagataaattcaggtattattttcccagtgagggatttgttccaagcgat
gctttcactaacataaccccttactatggccttccggctgctgaggcagatttaagtcct
aatttctaa
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