Runella slithyformis: Runsl_0629
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Entry
Runsl_0629 CDS
T01553
Name
(GenBank) TonB-dependent receptor plug
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsi02000
]
Runsl_0629
Transporters [BR:
rsi02000
]
Other transporters
Pores ion channels [TC:
1
]
Runsl_0629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
CarboxypepD_reg
TTR_TEN1-4
MetallophosN
Motif
Other DBs
NCBI-ProteinID:
AEI47072
UniProt:
A0A7U3ZH13
LinkDB
All DBs
Position
complement(749724..752822)
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AA seq
1032 aa
AA seq
DB search
MKRKFILPKSKFRALSSLFALILLFTSTLFAQQSITGKVSAGDGEVLVGVNVSVKGTTRG
TTTDANGTYRIDAASNSTLVFSYIGYLTKEVPVGNQSTINVSLAVNDKTLNEIVVVGYGS
QVKKEVTGAVQTISAKEIKDLPVSQIAQKLQGQVAGVQINQTTGRPGQGMNVRIRGQLSV
SGGSDPLYVVDGFPITGNIGALNPDEIEEISILKDAASTALYGSRAANGVVLITTKRGKS
GQTNVSFNVFTGTQVVPKKGRFEMMDAVEFAQFKKEYYEDAKQPVPAEFQNPSIYEGKNN
DWYDAVLRRAPLQSYNLTVTSNKDRVSTSLVAGVFNQEGVVINTKYQRYSLRLNSEYKVS
DKVTLGLNIAPQYVFDNTPRTDGDRGTGILFNAIHTWPVMPIRDDKGDLTLFNRFPASTG
NIFAYPNWVRAANELTNETKQTNILTNAYISYSPIKGLTLKSTFNVEMLNQKFFFFNPST
ATSAINTAVPVTAVSIREATDNLGWLNENLATYVKSFNNHNFELLAGYTNQSFRSESSRI
QADTYSDDRLPTIQGAINIARGGTNSNVQEWALTSLLSRLAYNYKGKYLFTASIRRDGSS
RFGLNNRWGTFPSVSAGWVVSDEDFMKNFSKVSFAKLRASLGVTGNNNIGNYTQYALINN
TVNAVFGNNVAPGAAVTSLANPNLGWETTRQLDIGFDLGFLNDRFQFTYDYYTKNTTNLL
FAVQIPQESGFTNFNDNIGEIKFWGHEFSLNTRIVDRGKLKWSVNSNISFNRNKVIALAD
GIDRVYGLHHITQVGRPFGQFYGHLANGVYMNAEDLRNSPVVPGRSFIGTIKLVDVNGDG
VITNGGDRDDRTILGNPFPKFTYGITTNLNYGNFDFSVIGSGSQGNQLWVRHLYSTANLD
GVFNLHREVKYRFRSEANPGKGFYGTTVGGGTATGIERDWQNSRFVADASFFTIKNITLG
YTINKRNKLFRSARVYASIQQALVFTKYWGGSNPETSAQQNGQGDGGNLSPGVDLFNYPV
PRTSTIGVNFNF
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaaatttattcttcctaagagtaaattcagagcactttcttccctctttgcc
ctgattttactttttacctctactttgtttgcacagcaatctattaccggaaaagtttca
gccggtgacggtgaagttctggttggtgtaaacgtaagcgttaaaggaaccaccaggggt
accacaacagatgctaacggtacgtacagaatcgacgcggcaagcaattcgacgctggtt
ttcagttatatcggttatctgaccaaagaagtgccggtcggcaaccaatcgacaatcaac
gtaagcttagccgtgaatgataaaacccttaatgagatcgtcgtcgtgggttatggaagt
caagtgaaaaaagaagtaacgggtgccgttcagaccattagcgcgaaagaaatcaaagac
cttccggtatcgcaaatagcccaaaagcttcaggggcaagtagccggggtacaaattaac
caaacgacaggtcggcccggtcaggggatgaacgtccgtatcagagggcaactttcggta
tcgggtggcagcgacccgctttacgttgtggacggttttcccattacgggaaatatcggt
gctctcaaccccgatgaaattgaagaaatatccattctgaaagatgccgcttccactgcg
ctgtatggttcgcgggcggccaacggagtagtactgattaccacgaaaagagggaagtca
ggtcaaacaaacgtaagcttcaacgtatttacgggtacgcaggtagtgcccaagaaagga
cgtttcgagatgatggatgcggttgagtttgctcagtttaaaaaagaatactacgaagat
gccaaacagcccgttcctgcggaatttcaaaacccatctatttatgaaggtaaaaacaat
gactggtacgatgccgtgcttcgtcgtgctcccctgcaaagctacaacctgaccgtgact
tccaataaagatcgggtgagcacttcattggtcgcaggggtattcaaccaggaaggtgtt
gtcatcaatactaagtatcagcgttactcacttcgtttgaacagcgaatataaggtctct
gacaaagtaacccttggattaaacattgctcctcagtatgtatttgacaatacaccgcgt
actgacggtgaccgtggtacgggtattttgtttaatgctatccacacgtggccggtgatg
cctattcgtgacgacaaaggcgatcttacgcttttcaaccgtttcccggcaagcacggga
aatatctttgcttaccctaactgggttcgtgcggccaatgagctgaccaatgaaacaaag
caaaccaacattctcacaaacgcgtacatttcctacagccctatcaagggtttgactttg
aagtcaacgttcaacgtcgaaatgctgaatcaaaagttcttcttctttaacccttctacg
gcgaccagcgccatcaatacggcggtgccggttacggcggtttcgatacgggaagccaca
gataatttgggctggttaaatgagaacttggctacgtatgtcaaatcattcaacaatcac
aattttgaactattggcaggttataccaaccaaagcttccggagcgaatcaagccgtatc
caagcggatacgtactctgacgaccgcctgccgacaattcagggagctattaacatcgct
cgtggaggaaccaacagcaacgtgcaggaatgggcattgacttcattgctttcccgtttg
gcctacaactacaaaggcaaatatcttttcactgcctctattcgtcgcgacggctcttct
cgcttcggtttaaacaatcgttggggtacttttccttcagtatcagcgggttgggtagta
tcggatgaggattttatgaagaatttcagcaaagtgtcttttgcgaaattgagagcaagt
ttgggggtaacgggtaacaacaatatcggtaattatacacagtacgcccttattaataat
accgtaaatgctgtttttggaaacaacgtagcgcccggcgccgctgtaacctctcttgcc
aaccctaaccttggttgggaaacaacccgtcagctggatattggttttgacttgggtttc
ctcaatgaccgttttcaatttacgtacgactattacaccaaaaataccactaacctgtta
tttgcagtacaaattccgcaggaatcaggctttaccaacttcaatgacaatatcggtgaa
atcaaattctggggacatgaattctcactcaacacccgtatcgttgaccgcggtaagttg
aagtggagtgtaaactcaaacatctcgttcaaccgcaacaaagtgattgcgctggccgac
ggtattgaccgtgtgtatggccttcaccacattactcaagttggcaggccgtttggccaa
ttctatggccaccttgccaatggggtatatatgaacgccgaagacctcagaaactcaccc
gttgtaccgggtcgttcatttatcggaacgattaaactcgttgacgtaaacggtgacggt
gtgattaccaacggaggagacagagacgaccgcacgatcttgggtaatccatttcctaaa
tttacgtacggaataaccacaaacttaaactatggaaactttgatttcagcgtaataggt
tcgggttcgcagggcaatcaattgtgggtacgtcacttatacagtactgccaaccttgat
ggggtgttcaacctgcacagagaagtaaaatatcgcttccgctcagaagccaatccgggt
aaaggattctacggaaccaccgtgggcggcggtactgcaacgggtattgagcgtgactgg
caaaacagccgtttcgtagccgatgcttcgttctttaccatcaaaaatattacgctgggt
tatacaattaataagcgtaataagcttttccgctcggcacgtgtgtatgcctctattcag
caggcgttggtgtttaccaaatactggggcgggtctaaccccgaaaccagtgctcagcaa
aatggtcaaggtgatggaggaaacctcagtccgggcgttgacttgtttaattatcccgta
ccgcgtacgtcaaccattggggtaaactttaacttctaa
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