Runella slithyformis: Runsl_0839
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Entry
Runsl_0839 CDS
T01553
Name
(GenBank) (3R)-hydroxymyristoyl-(acyl-carrier-protein)dehydratase
KO
K16363
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
3.5.1.108
4.2.1.59
]
Organism
rsi
Runella slithyformis
Pathway
rsi00061
Fatty acid biosynthesis
rsi00540
Lipopolysaccharide biosynthesis
rsi01100
Metabolic pathways
rsi01212
Fatty acid metabolism
Module
rsi_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Runsl_0839
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Runsl_0839
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rsi01005
]
Runsl_0839
01004 Lipid biosynthesis proteins [BR:
rsi01004
]
Runsl_0839
Enzymes [BR:
rsi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
Runsl_0839
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
Runsl_0839
Lipopolysaccharide biosynthesis proteins [BR:
rsi01005
]
Lipid A
Runsl_0839
Lipid biosynthesis proteins [BR:
rsi01004
]
Fatty acid synthase
Component type
Runsl_0839
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
FabA
ApeI-like
ApeP-like
UvsW-1
Motif
Other DBs
NCBI-ProteinID:
AEI47277
UniProt:
A0A7U3ZHF0
LinkDB
All DBs
Position
983408..984802
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AA seq
464 aa
AA seq
DB search
MLNIKQQTIEKAVSVSGVGLHTGVTATMTFLPAPVNHGYKFQRIDLEGQPIIDADVDNVV
DVSRGTTLEQSGARVYTVEHTLAALVGLQIDNVLIQLDGPEPPIMDGSSIKFVEALRDAG
IEEQNASRNYFEISEPVRYIHAEKDIEMVALPLNDYRLTVMVDYNSQVINSQHASLNDLT
TFSREIASCRTFCFLHELEALYKANLIKGGDLTNAIVIVDRDIEEGELDYLSQLLNKPKI
GVNKKVGILNNIDLHYPNEMARHKLLDVVGDLALVGRPIKAQILAARPGHAANVALAKKI
KKLMESAKSHVPHYDPKLPPVMDLKRICELLPHRYPFLMIDKIVYMDENSVAGLKNVTMN
EPFFTGHFPNNPVMPGVLQMEAMAQTGAILALSSQPDPENYWPFLAAIENCRFRRNVVPG
DTVIFKCEFTAPIKRGIVKMHGAGYVAGQMVCEADMTASLVRKR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacatcaaacaacaaaccatcgaaaaagccgtatcagtatcgggtgtgggcctg
cacacgggcgtaacggcaaccatgacttttttgccggcccccgtcaaccacggctataaa
ttccaacgcattgacttggaaggacaacccattattgacgccgacgtagacaacgtggtg
gatgtatcgcgcggtactacgctggagcaaagcggcgcccgggtctataccgtagagcac
acgctcgcggcactcgtagggttacagattgacaacgtactcattcagctggatggccct
gagccacccattatggatggaagttccattaaatttgtagaagcgctccgcgacgccggc
atcgaagaacaaaatgcttctcgcaactacttcgaaatttcggaacctgtgcgctacatt
catgccgaaaaagacattgagatggtggccctgccgctcaacgattatcgactgacggtg
atggtggactataactcgcaagtcattaacagtcaacacgcttcgctcaacgacctgacc
actttctcgcgcgagatagcgtcttgccgtacgttctgctttttgcacgaactggaagcg
ctgtataaggctaacctcatcaaaggcggtgatctgaccaacgccatcgtaatcgtggac
cgcgatattgaagaaggtgagttggattatctttcccaattattgaataaacccaaaatc
ggggtcaataagaaggtgggcatccttaataatatcgacctgcattaccccaacgaaatg
gcgcgccacaagttgttggatgtggtcggtgatctggccttggtaggccgtcccatcaaa
gcgcaaattctggccgcccgtccgggccacgccgccaacgtagcgctggccaagaagatc
aagaaattgatggaatcggccaagagccatgtgcctcactatgaccccaaactgcctccg
gtcatggatctgaagcgcatctgtgaattgctgccgcaccgttatccgtttttaatgatc
gataagatcgtatacatggatgaaaacagcgtagccggtctcaaaaatgtgacgatgaat
gagccgtttttcaccggacactttccaaacaatccggtgatgccgggcgttttacaaatg
gaagcaatggcccaaaccggcgcgatccttgccctgagcagccaacccgatcccgaaaat
tactggccgtttttggccgccattgaaaactgccgtttccgccgtaacgttgtacccggc
gatacggtcattttcaaatgcgaatttacggcaccgatcaaacgcggcattgtaaaaatg
cacggtgccggatatgtagcaggtcaaatggtctgcgaagctgacatgacggcgagttta
gttagaaaaagatag
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