Runella slithyformis: Runsl_1288
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Entry
Runsl_1288 CDS
T01553
Name
(GenBank) RagB/SusD domain-containing protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsi02000
]
Runsl_1288
Transporters [BR:
rsi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Runsl_1288
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
TPR_19
Motif
Other DBs
NCBI-ProteinID:
AEI47715
UniProt:
A0A7U3ZIA3
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All DBs
Position
1478231..1479739
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AA seq
502 aa
AA seq
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MKKTISKFTYLSALGAFALSSCTDLVVQEKDSTIVKTTGGSTTTGNPTELLNALYNDLGV
FNDQANLYSLGQHTSAEMIPPTRGVDWGDNGVWRTLHSHTWDATHAQVLNTWNTMNGRAF
QCEQLLASNPSPVQAAEAKAIRAMYMYHVMDFFGQVPRRTVDQGVDALPTVLTRSEAFDF
IVKDLTEALPNLPRLGPAAINARASKAMANALLARLHLNKAVYKSAKPEGPYTFDKADMD
KVVQYCDAVKADGFDLDPDFFNPFTANVSKDKIFTDLQGSPRNRWMMTMHYDQGGFDAEK
DGPWNGFATLAEFYDKFEANDARRFREVGFQKGYGGVHKGFLIGQQFREDKTPIVDSRSK
KPLIFTRDVPLAGASTEKGIRVIKYHPADFGKYLIFRYADVHLMKTEALYRAGNTAEALK
LLNELRTLRKATTATSINDDVMLRERGLELYWEGIARTDEIRFGKFNRKYQDVTNIEPYT
VLFPIPALAIASNTNLKQNPGY
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacaatatcaaaattcacgtatttgagtgcattgggagcatttgccctcagc
tcttgtaccgatttagttgttcaggaaaaagattcaaccattgttaagacaactggcggt
tctaccactaccggtaatccaacagaattacttaatgcactttacaatgatttgggcgta
ttcaatgaccaggcaaatttatattctcttggccagcatacgtcagccgaaatgattcct
cccactcgtggggtagactggggtgacaatggcgtttggcgtacactccactcacacact
tgggatgctacacacgcacaggtcttaaacacttggaatactatgaatggccgtgctttt
cagtgtgagcaacttttagcatctaatccgagtccggtacaagcagctgaagcgaaagca
atccgcgccatgtatatgtaccatgtaatggacttctttggtcaagtaccacgccgtacc
gttgatcaaggtgtggatgcattgcctactgtgcttacgcgctcagaagcctttgatttt
atcgtaaaggatctgacagaagcccttcctaacttgcctaggttggggcctgcagctatc
aacgcacgtgcttctaaggcgatggccaacgcgctattggcacgtttgcatttgaacaaa
gcagtctataaatcagccaagcccgaaggaccatatacgttcgataaagcagatatggac
aaagtggtacagtattgcgatgcagtaaaagcggatggtttcgatttagaccccgatttc
ttcaatcctttcactgccaacgtatcaaaagataaaatctttactgacttgcaaggctcg
cctcgtaaccgttggatgatgactatgcactatgaccaaggtggttttgatgctgaaaaa
gatggcccatggaatggatttgctactttggcggagttttatgataagtttgaagccaat
gatgcgcgtcgtttccgtgaagtaggcttccaaaaaggctacggtggtgtgcacaaaggc
ttcctgattggtcagcagttcagagaggataaaacaccaattgtggattcacgttctaaa
aagcctttgatcttcactcgtgacgtacctttggccggtgcttctactgaaaaaggtatc
cgtgtcatcaagtaccacccggcagattttggtaagtatttgattttccgttatgctgat
gtgcatttaatgaaaacagaagccttgtatcgtgccggtaatacagccgaggcattgaag
ctgttgaacgaactcagaacacttcgcaaagctactactgcaacgtctattaatgatgat
gtgatgttgagagaaagaggacttgagttatactgggaaggaattgcacgtactgatgaa
attcgtttcggtaagttcaaccgcaaataccaagatgtaacaaatatagagccttacacc
gtattgttcccaatacctgctttggccattgcctcaaacaccaacttgaagcaaaatcca
ggctactaa
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